Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ldb1P70662 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ldb1P70662 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ldb1P70662 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ldb1P70662 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Ldb1P70662 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Ldb1P70662 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ldb1P70662 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.37□□□□□ -0.43
Ldb1P70662 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ldb1P70662 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ldb1P70662 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Ldb1P70662 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.37□□□□□ -0.43
Ldb1P70662 Gm14127-201ENSMUST00000117906 678 ntBASIC12.37□□□□□ -0.43
Ldb1P70662 Gm13736-201ENSMUST00000119272 253 ntBASIC12.37□□□□□ -0.43
Ldb1P70662 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.37□□□□□ -0.43
Ldb1P70662 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.37□□□□□ -0.43
Ldb1P70662 Gm37424-201ENSMUST00000191727 561 ntBASIC12.37□□□□□ -0.43
Ldb1P70662 Gm19184-201ENSMUST00000196798 928 ntBASIC12.37□□□□□ -0.43
Ldb1P70662 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.37□□□□□ -0.43
Ldb1P70662 Gm18062-201ENSMUST00000208020 547 ntBASIC12.37□□□□□ -0.43
Ldb1P70662 Gm18055-201ENSMUST00000208254 547 ntBASIC12.37□□□□□ -0.43
Ldb1P70662 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.37□□□□□ -0.43
Ldb1P70662 Gm45880-201ENSMUST00000213041 853 ntBASIC12.37□□□□□ -0.43
Ldb1P70662 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Gm45925-201ENSMUST00000218882 744 ntBASIC12.37□□□□□ -0.43
Ldb1P70662 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.37□□□□□ -0.43
Ldb1P70662 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Ldb1P70662 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ldb1P70662 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ldb1P70662 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ldb1P70662 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.36□□□□□ -0.43
Ldb1P70662 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.36□□□□□ -0.43
Ldb1P70662 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.36□□□□□ -0.43
Ldb1P70662 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ldb1P70662 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Ldb1P70662 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.36□□□□□ -0.43
Ldb1P70662 Gm12957-201ENSMUST00000117835 377 ntBASIC12.36□□□□□ -0.43
Ldb1P70662 Gm6023-201ENSMUST00000118217 606 ntBASIC12.36□□□□□ -0.43
Ldb1P70662 Gm13875-201ENSMUST00000120162 282 ntBASIC12.36□□□□□ -0.43
Ldb1P70662 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.36□□□□□ -0.43
Ldb1P70662 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Gm38158-201ENSMUST00000194617 339 ntBASIC12.36□□□□□ -0.43
Ldb1P70662 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.36□□□□□ -0.43
Ldb1P70662 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Ldb1P70662 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.36□□□□□ -0.43
Ldb1P70662 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.36□□□□□ -0.43
Ldb1P70662 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ldb1P70662 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ldb1P70662 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ldb1P70662 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms