Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nphp4P59240 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Nphp4P59240 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nphp4P59240 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Nphp4P59240 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Gm24891-201ENSMUST00000104391 136 ntBASIC16.69■□□□□ 0.26
Nphp4P59240 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC16.69■□□□□ 0.26
Nphp4P59240 Gm13263-201ENSMUST00000121271 838 ntBASIC16.69■□□□□ 0.26
Nphp4P59240 Gm28686-201ENSMUST00000187404 609 ntBASIC16.69■□□□□ 0.26
Nphp4P59240 Gm5714-201ENSMUST00000197343 566 ntBASIC16.69■□□□□ 0.26
Nphp4P59240 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC16.69■□□□□ 0.26
Nphp4P59240 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Gm4797-201ENSMUST00000219075 1283 ntBASIC16.69■□□□□ 0.26
Nphp4P59240 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nphp4P59240 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nphp4P59240 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Nphp4P59240 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.68■□□□□ 0.26
Nphp4P59240 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Nphp4P59240 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Nphp4P59240 Mup-ps26-201ENSMUST00000121751 202 ntBASIC16.68■□□□□ 0.26
Nphp4P59240 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC16.68■□□□□ 0.26
Nphp4P59240 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nphp4P59240 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Gm38117-201ENSMUST00000194653 939 ntBASIC16.68■□□□□ 0.26
Nphp4P59240 AC154849.4-201ENSMUST00000224868 365 ntBASIC16.68■□□□□ 0.26
Nphp4P59240 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 AC129931.1-201ENSMUST00000228865 1861 ntBASIC16.68■□□□□ 0.26
Nphp4P59240 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Nphp4P59240 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Nphp4P59240 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nphp4P59240 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Nphp4P59240 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC16.67■□□□□ 0.26
Nphp4P59240 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.67■□□□□ 0.26
Nphp4P59240 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Nphp4P59240 Gm11663-201ENSMUST00000117888 290 ntBASIC16.67■□□□□ 0.26
Nphp4P59240 Gm17391-201ENSMUST00000171036 126 ntBASIC16.67■□□□□ 0.26
Nphp4P59240 Gm43916-201ENSMUST00000205062 967 ntBASIC16.67■□□□□ 0.26
Nphp4P59240 Gm6905-201ENSMUST00000205729 511 ntBASIC16.67■□□□□ 0.26
Nphp4P59240 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.67■□□□□ 0.26
Nphp4P59240 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC16.67■□□□□ 0.26
Nphp4P59240 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.67■□□□□ 0.26
Nphp4P59240 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 AC091458.1-201ENSMUST00000220902 1361 ntBASIC16.67■□□□□ 0.26
Nphp4P59240 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nphp4P59240 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Nphp4P59240 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nphp4P59240 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms