Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx2P43241 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdx2P43241 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.81□□□□□ -0.52
Cdx2P43241 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Cdx2P43241 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx2P43241 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.81□□□□□ -0.52
Cdx2P43241 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdx2P43241 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx2P43241 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx2P43241 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx2P43241 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx2P43241 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx2P43241 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx2P43241 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx2P43241 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx2P43241 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdx2P43241 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx2P43241 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.81□□□□□ -0.52
Cdx2P43241 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdx2P43241 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Cdx2P43241 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdx2P43241 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdx2P43241 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.8□□□□□ -0.52
Cdx2P43241 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cdx2P43241 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdx2P43241 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Cdx2P43241 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Cdx2P43241 Gm23085-201ENSMUST00000157849 293 ntBASIC11.8□□□□□ -0.52
Cdx2P43241 Gm8194-201ENSMUST00000159783 859 ntBASIC11.8□□□□□ -0.52
Cdx2P43241 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.8□□□□□ -0.52
Cdx2P43241 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
Cdx2P43241 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Gm27530-201ENSMUST00000184096 98 ntBASIC11.8□□□□□ -0.52
Cdx2P43241 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdx2P43241 Gm9540-201ENSMUST00000188230 478 ntBASIC11.8□□□□□ -0.52
Cdx2P43241 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Gm8365-201ENSMUST00000197334 648 ntBASIC11.8□□□□□ -0.52
Cdx2P43241 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Gm10752-201ENSMUST00000218348 729 ntBASIC11.8□□□□□ -0.52
Cdx2P43241 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.8□□□□□ -0.52
Cdx2P43241 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.8□□□□□ -0.52
Cdx2P43241 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.8□□□□□ -0.52
Cdx2P43241 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdx2P43241 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdx2P43241 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cdx2P43241 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdx2P43241 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cdx2P43241 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdx2P43241 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.79□□□□□ -0.52
Cdx2P43241 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.79□□□□□ -0.52
Cdx2P43241 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Cdx2P43241 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.79□□□□□ -0.52
Cdx2P43241 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cdx2P43241 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.79□□□□□ -0.52
Cdx2P43241 Gm43058-201ENSMUST00000197645 625 ntBASIC11.79□□□□□ -0.52
Cdx2P43241 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.79□□□□□ -0.52
Cdx2P43241 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms