Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc8P09025 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxc8P09025 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.16□□□□□ -0.3
Hoxc8P09025 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc8P09025 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc8P09025 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC13.16□□□□□ -0.3
Hoxc8P09025 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Gm7666-201ENSMUST00000146631 819 ntBASIC13.16□□□□□ -0.3
Hoxc8P09025 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.16□□□□□ -0.3
Hoxc8P09025 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxc8P09025 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Hoxc8P09025 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Hoxc8P09025 Gm28686-201ENSMUST00000187404 609 ntBASIC13.16□□□□□ -0.3
Hoxc8P09025 Gm9540-201ENSMUST00000188230 478 ntBASIC13.16□□□□□ -0.3
Hoxc8P09025 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.16□□□□□ -0.3
Hoxc8P09025 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.16□□□□□ -0.3
Hoxc8P09025 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.16□□□□□ -0.3
Hoxc8P09025 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxc8P09025 AC129219.2-201ENSMUST00000224324 701 ntBASIC13.16□□□□□ -0.3
Hoxc8P09025 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.16□□□□□ -0.3
Hoxc8P09025 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.16□□□□□ -0.3
Hoxc8P09025 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc8P09025 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc8P09025 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc8P09025 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.16□□□□□ -0.3
Hoxc8P09025 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hoxc8P09025 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hoxc8P09025 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc8P09025 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.15□□□□□ -0.3
Hoxc8P09025 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.15□□□□□ -0.3
Hoxc8P09025 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.15□□□□□ -0.3
Hoxc8P09025 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Hoxc8P09025 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc8P09025 Gm11660-201ENSMUST00000120955 412 ntBASIC13.15□□□□□ -0.3
Hoxc8P09025 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.15□□□□□ -0.3
Hoxc8P09025 Gm4310-201ENSMUST00000177847 889 ntBASIC13.15□□□□□ -0.3
Hoxc8P09025 Gm5706-201ENSMUST00000181525 993 ntBASIC13.15□□□□□ -0.3
Hoxc8P09025 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Gm8365-201ENSMUST00000197334 648 ntBASIC13.15□□□□□ -0.3
Hoxc8P09025 Gm9463-201ENSMUST00000206707 601 ntBASIC13.15□□□□□ -0.3
Hoxc8P09025 Gm45575-201ENSMUST00000210283 548 ntBASIC13.15□□□□□ -0.3
Hoxc8P09025 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.15□□□□□ -0.3
Hoxc8P09025 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc8P09025 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.15□□□□□ -0.3
Hoxc8P09025 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc8P09025 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Hoxc8P09025 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc8P09025 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxc8P09025 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxc8P09025 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Hoxc8P09025 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc8P09025 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms