Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.73□□□□□ -0.37
P01878 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.73□□□□□ -0.37
P01878 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.73□□□□□ -0.37
P01878 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
P01878 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
P01878 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
P01878 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
P01878 Gm15131-201ENSMUST00000119124 595 ntBASIC12.73□□□□□ -0.37
P01878 Gm11667-201ENSMUST00000119828 486 ntBASIC12.73□□□□□ -0.37
P01878 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.73□□□□□ -0.37
P01878 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.73□□□□□ -0.37
P01878 Gm19459-201ENSMUST00000176240 835 ntBASIC12.73□□□□□ -0.37
P01878 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Gm2965-201ENSMUST00000198365 343 ntBASIC12.73□□□□□ -0.37
P01878 Mir7686-201ENSMUST00000200604 57 ntBASIC12.73□□□□□ -0.37
P01878 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.73□□□□□ -0.37
P01878 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.73□□□□□ -0.37
P01878 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.73□□□□□ -0.37
P01878 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.73□□□□□ -0.37
P01878 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.73□□□□□ -0.37
P01878 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.73□□□□□ -0.37
P01878 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P01878 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.72□□□□□ -0.37
P01878 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
P01878 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
P01878 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.72□□□□□ -0.37
P01878 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.72□□□□□ -0.37
P01878 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
P01878 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Gm17391-201ENSMUST00000171036 126 ntBASIC12.72□□□□□ -0.37
P01878 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
P01878 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.72□□□□□ -0.37
P01878 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.72□□□□□ -0.37
P01878 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.72□□□□□ -0.37
P01878 Gm44882-201ENSMUST00000205702 802 ntBASIC12.72□□□□□ -0.37
P01878 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
P01878 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Gm9797-202ENSMUST00000218003 294 ntBASIC12.72□□□□□ -0.37
P01878 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.72□□□□□ -0.37
P01878 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.72□□□□□ -0.37
P01878 Gm10179-201ENSMUST00000086233 688 ntBASIC12.72□□□□□ -0.37
P01878 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
P01878 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P01878 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.71□□□□□ -0.37
P01878 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.71□□□□□ -0.37
P01878 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P01878 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P01878 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
P01878 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
P01878 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P01878 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P01878 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms