Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AC015936.2-201ENST00000593177 259 ntBASIC17.44■□□□□ 0.38
DDX39AO00148 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX39AO00148 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX39AO00148 AL008721.1-201ENST00000609964 604 ntBASIC17.44■□□□□ 0.38
DDX39AO00148 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX39AO00148 AL162274.1-201ENST00000617191 1098 ntBASIC17.44■□□□□ 0.38
DDX39AO00148 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.44■□□□□ 0.38
DDX39AO00148 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
DDX39AO00148 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
DDX39AO00148 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
DDX39AO00148 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
DDX39AO00148 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
DDX39AO00148 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.44■□□□□ 0.38
DDX39AO00148 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX39AO00148 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.44■□□□□ 0.38
DDX39AO00148 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DDX39AO00148 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
DDX39AO00148 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
DDX39AO00148 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.43■□□□□ 0.38
DDX39AO00148 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
DDX39AO00148 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
DDX39AO00148 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX39AO00148 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 ACTG1P3-201ENST00000431775 1114 ntBASIC17.43■□□□□ 0.38
DDX39AO00148 AC244107.1-201ENST00000442033 332 ntBASIC17.43■□□□□ 0.38
DDX39AO00148 BCRP2-202ENST00000447763 634 ntBASIC17.43■□□□□ 0.38
DDX39AO00148 AC093433.1-201ENST00000458048 571 ntBASIC17.43■□□□□ 0.38
DDX39AO00148 BCRP6-201ENST00000510112 632 ntBASIC17.43■□□□□ 0.38
DDX39AO00148 BCRP7-201ENST00000511549 544 ntBASIC17.43■□□□□ 0.38
DDX39AO00148 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX39AO00148 AC068587.3-201ENST00000526613 355 ntBASIC17.43■□□□□ 0.38
DDX39AO00148 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
DDX39AO00148 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
DDX39AO00148 ENPP7P5-201ENST00000541031 1031 ntBASIC17.43■□□□□ 0.38
DDX39AO00148 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.43■□□□□ 0.38
DDX39AO00148 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
DDX39AO00148 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.43■□□□□ 0.38
DDX39AO00148 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.43■□□□□ 0.38
DDX39AO00148 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.43■□□□□ 0.38
DDX39AO00148 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
DDX39AO00148 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
DDX39AO00148 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.43■□□□□ 0.38
DDX39AO00148 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
DDX39AO00148 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 AC090616.6-203ENST00000579186 1945 ntBASIC17.43■□□□□ 0.38
DDX39AO00148 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DDX39AO00148 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
DDX39AO00148 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
DDX39AO00148 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
DDX39AO00148 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
DDX39AO00148 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.42■□□□□ 0.38
DDX39AO00148 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.42■□□□□ 0.38
DDX39AO00148 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX39AO00148 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
DDX39AO00148 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.42■□□□□ 0.38
DDX39AO00148 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
DDX39AO00148 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
DDX39AO00148 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX39AO00148 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.42■□□□□ 0.38
DDX39AO00148 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.42■□□□□ 0.38
DDX39AO00148 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 GAPDHP40-201ENST00000505218 1006 ntBASIC17.42■□□□□ 0.38
DDX39AO00148 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DDX39AO00148 PTP4A1P2-201ENST00000546033 454 ntBASIC17.42■□□□□ 0.38
DDX39AO00148 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.42■□□□□ 0.38
DDX39AO00148 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms