Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Mir692-1-201ENSMUST00000102263 109 ntBASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Gm13369-201ENSMUST00000119442 987 ntBASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Gm11803-201ENSMUST00000119966 444 ntBASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Gm18018-201ENSMUST00000198273 408 ntBASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Gm44882-201ENSMUST00000205702 802 ntBASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Gm32025-201ENSMUST00000217960 307 ntBASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Gm24136-201ENSMUST00000083374 165 ntBASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trbv29A0A0G2LB96 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Gm19163-201ENSMUST00000223313 780 ntBASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Gm10146-201ENSMUST00000072739 309 ntBASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trbv29A0A0G2LB96 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms