Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
H2afb2S4R1M3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
H2afb2S4R1M3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
H2afb2S4R1M3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
H2afb2S4R1M3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.93■□□□□ 0.94
H2afb2S4R1M3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H2afb2S4R1M3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
H2afb2S4R1M3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
H2afb2S4R1M3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
H2afb2S4R1M3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2afb2S4R1M3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2afb2S4R1M3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2afb2S4R1M3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2afb2S4R1M3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
H2afb2S4R1M3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
H2afb2S4R1M3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.91■□□□□ 0.94
H2afb2S4R1M3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb2S4R1M3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb2S4R1M3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb2S4R1M3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
H2afb2S4R1M3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
H2afb2S4R1M3 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.9■□□□□ 0.94
H2afb2S4R1M3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
H2afb2S4R1M3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
H2afb2S4R1M3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
H2afb2S4R1M3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
H2afb2S4R1M3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
H2afb2S4R1M3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
H2afb2S4R1M3 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.89■□□□□ 0.93
H2afb2S4R1M3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2afb2S4R1M3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
H2afb2S4R1M3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2afb2S4R1M3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2afb2S4R1M3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2afb2S4R1M3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
H2afb2S4R1M3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb2S4R1M3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
H2afb2S4R1M3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb2S4R1M3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb2S4R1M3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb2S4R1M3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb2S4R1M3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb2S4R1M3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
H2afb2S4R1M3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
H2afb2S4R1M3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
H2afb2S4R1M3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
H2afb2S4R1M3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
H2afb2S4R1M3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
H2afb2S4R1M3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb2S4R1M3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
H2afb2S4R1M3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb2S4R1M3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb2S4R1M3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb2S4R1M3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb2S4R1M3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb2S4R1M3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb2S4R1M3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb2S4R1M3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb2S4R1M3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.86■□□□□ 0.93
H2afb2S4R1M3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
H2afb2S4R1M3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
H2afb2S4R1M3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
H2afb2S4R1M3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
H2afb2S4R1M3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.85■□□□□ 0.93
H2afb2S4R1M3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.85■□□□□ 0.93
H2afb2S4R1M3 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.85■□□□□ 0.93
H2afb2S4R1M3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
H2afb2S4R1M3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.85■□□□□ 0.93
H2afb2S4R1M3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb2S4R1M3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.84■□□□□ 0.93
H2afb2S4R1M3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb2S4R1M3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb2S4R1M3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb2S4R1M3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb2S4R1M3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
H2afb2S4R1M3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
H2afb2S4R1M3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
H2afb2S4R1M3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
H2afb2S4R1M3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
H2afb2S4R1M3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
H2afb2S4R1M3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb2S4R1M3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb2S4R1M3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
H2afb2S4R1M3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb2S4R1M3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
H2afb2S4R1M3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
H2afb2S4R1M3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms