Protein–RNA interactions for Protein: Q9JJY3

Smpd3, Sphingomyelin phosphodiesterase 3, mousemouse

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd3Q9JJY3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smpd3Q9JJY3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Smpd3Q9JJY3 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.14■□□□□ 0.81
Smpd3Q9JJY3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.14■□□□□ 0.81
Smpd3Q9JJY3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd3Q9JJY3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.13■□□□□ 0.81
Smpd3Q9JJY3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd3Q9JJY3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd3Q9JJY3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd3Q9JJY3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd3Q9JJY3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smpd3Q9JJY3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.13■□□□□ 0.81
Smpd3Q9JJY3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd3Q9JJY3 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Smpd3Q9JJY3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smpd3Q9JJY3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Smpd3Q9JJY3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smpd3Q9JJY3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smpd3Q9JJY3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smpd3Q9JJY3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smpd3Q9JJY3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.11■□□□□ 0.81
Smpd3Q9JJY3 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.11■□□□□ 0.81
Smpd3Q9JJY3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smpd3Q9JJY3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smpd3Q9JJY3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smpd3Q9JJY3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smpd3Q9JJY3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Smpd3Q9JJY3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smpd3Q9JJY3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smpd3Q9JJY3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smpd3Q9JJY3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smpd3Q9JJY3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smpd3Q9JJY3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smpd3Q9JJY3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smpd3Q9JJY3 Gm10420-201ENSMUST00000121713 882 ntBASIC20.09■□□□□ 0.81
Smpd3Q9JJY3 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.09■□□□□ 0.81
Smpd3Q9JJY3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smpd3Q9JJY3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smpd3Q9JJY3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Smpd3Q9JJY3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.08■□□□□ 0.81
Smpd3Q9JJY3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smpd3Q9JJY3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smpd3Q9JJY3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.08■□□□□ 0.81
Smpd3Q9JJY3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smpd3Q9JJY3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Smpd3Q9JJY3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.08■□□□□ 0.8
Smpd3Q9JJY3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smpd3Q9JJY3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smpd3Q9JJY3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smpd3Q9JJY3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smpd3Q9JJY3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.07■□□□□ 0.8
Smpd3Q9JJY3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smpd3Q9JJY3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smpd3Q9JJY3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smpd3Q9JJY3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smpd3Q9JJY3 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.07■□□□□ 0.8
Smpd3Q9JJY3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smpd3Q9JJY3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smpd3Q9JJY3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smpd3Q9JJY3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smpd3Q9JJY3 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smpd3Q9JJY3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smpd3Q9JJY3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smpd3Q9JJY3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Smpd3Q9JJY3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smpd3Q9JJY3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.05■□□□□ 0.8
Smpd3Q9JJY3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Smpd3Q9JJY3 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.05■□□□□ 0.8
Smpd3Q9JJY3 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Smpd3Q9JJY3 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.05■□□□□ 0.8
Smpd3Q9JJY3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smpd3Q9JJY3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Smpd3Q9JJY3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smpd3Q9JJY3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smpd3Q9JJY3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Smpd3Q9JJY3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.04■□□□□ 0.8
Smpd3Q9JJY3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Smpd3Q9JJY3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smpd3Q9JJY3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smpd3Q9JJY3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smpd3Q9JJY3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smpd3Q9JJY3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smpd3Q9JJY3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smpd3Q9JJY3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smpd3Q9JJY3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Smpd3Q9JJY3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smpd3Q9JJY3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Smpd3Q9JJY3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smpd3Q9JJY3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smpd3Q9JJY3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Smpd3Q9JJY3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
Smpd3Q9JJY3 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.02■□□□□ 0.8
Smpd3Q9JJY3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smpd3Q9JJY3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smpd3Q9JJY3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Smpd3Q9JJY3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Smpd3Q9JJY3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smpd3Q9JJY3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smpd3Q9JJY3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smpd3Q9JJY3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms