Protein–RNA interactions for Protein: Q9D413

Sh2d6, SH2 domain-containing protein 6, mousemouse

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d6Q9D413 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d6Q9D413 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d6Q9D413 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d6Q9D413 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sh2d6Q9D413 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh2d6Q9D413 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Gm7417-201ENSMUST00000192950 473 ntBASIC17.34■□□□□ 0.37
Sh2d6Q9D413 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.34■□□□□ 0.37
Sh2d6Q9D413 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Sh2d6Q9D413 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d6Q9D413 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d6Q9D413 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d6Q9D413 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d6Q9D413 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d6Q9D413 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh2d6Q9D413 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d6Q9D413 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sh2d6Q9D413 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.33■□□□□ 0.36
Sh2d6Q9D413 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.33■□□□□ 0.36
Sh2d6Q9D413 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh2d6Q9D413 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d6Q9D413 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d6Q9D413 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d6Q9D413 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.32■□□□□ 0.36
Sh2d6Q9D413 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d6Q9D413 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.32■□□□□ 0.36
Sh2d6Q9D413 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.32■□□□□ 0.36
Sh2d6Q9D413 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d6Q9D413 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d6Q9D413 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d6Q9D413 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sh2d6Q9D413 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh2d6Q9D413 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh2d6Q9D413 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d6Q9D413 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh2d6Q9D413 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh2d6Q9D413 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.28■□□□□ 0.36
Sh2d6Q9D413 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2d6Q9D413 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2d6Q9D413 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2d6Q9D413 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Sh2d6Q9D413 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Sh2d6Q9D413 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2d6Q9D413 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2d6Q9D413 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2d6Q9D413 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh2d6Q9D413 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2d6Q9D413 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2d6Q9D413 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2d6Q9D413 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2d6Q9D413 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sh2d6Q9D413 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sh2d6Q9D413 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2d6Q9D413 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2d6Q9D413 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh2d6Q9D413 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Sh2d6Q9D413 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh2d6Q9D413 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh2d6Q9D413 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sh2d6Q9D413 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms