Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ndc80Q9D0F1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Gm13238-201ENSMUST00000117655 780 ntBASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ndc80Q9D0F1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Ndc80Q9D0F1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.18■□□□□ 0.98
Ndc80Q9D0F1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ndc80Q9D0F1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ndc80Q9D0F1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ndc80Q9D0F1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
Ndc80Q9D0F1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ndc80Q9D0F1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ndc80Q9D0F1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ndc80Q9D0F1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.16■□□□□ 0.98
Ndc80Q9D0F1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ndc80Q9D0F1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ndc80Q9D0F1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.16■□□□□ 0.98
Ndc80Q9D0F1 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.16■□□□□ 0.98
Ndc80Q9D0F1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ndc80Q9D0F1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ndc80Q9D0F1 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.15■□□□□ 0.98
Ndc80Q9D0F1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ndc80Q9D0F1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ndc80Q9D0F1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ndc80Q9D0F1 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.14■□□□□ 0.98
Ndc80Q9D0F1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.14■□□□□ 0.97
Ndc80Q9D0F1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ndc80Q9D0F1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ndc80Q9D0F1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ndc80Q9D0F1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ndc80Q9D0F1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc80Q9D0F1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc80Q9D0F1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc80Q9D0F1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc80Q9D0F1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc80Q9D0F1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ndc80Q9D0F1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc80Q9D0F1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc80Q9D0F1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc80Q9D0F1 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.12■□□□□ 0.97
Ndc80Q9D0F1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc80Q9D0F1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
Ndc80Q9D0F1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc80Q9D0F1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc80Q9D0F1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc80Q9D0F1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc80Q9D0F1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc80Q9D0F1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ndc80Q9D0F1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ndc80Q9D0F1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ndc80Q9D0F1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ndc80Q9D0F1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Ndc80Q9D0F1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Ndc80Q9D0F1 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.11■□□□□ 0.97
Ndc80Q9D0F1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ndc80Q9D0F1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Ndc80Q9D0F1 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.09■□□□□ 0.97
Ndc80Q9D0F1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Ndc80Q9D0F1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ndc80Q9D0F1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ndc80Q9D0F1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ndc80Q9D0F1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Ndc80Q9D0F1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc80Q9D0F1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc80Q9D0F1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc80Q9D0F1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc80Q9D0F1 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Ndc80Q9D0F1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc80Q9D0F1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc80Q9D0F1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.08■□□□□ 0.97
Ndc80Q9D0F1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ndc80Q9D0F1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ndc80Q9D0F1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ndc80Q9D0F1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ndc80Q9D0F1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms