Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcc1Q99LI2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Clcc1Q99LI2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.67■□□□□ 0.9
Clcc1Q99LI2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Clcc1Q99LI2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Clcc1Q99LI2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.67■□□□□ 0.9
Clcc1Q99LI2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.67■□□□□ 0.9
Clcc1Q99LI2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcc1Q99LI2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcc1Q99LI2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clcc1Q99LI2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.66■□□□□ 0.9
Clcc1Q99LI2 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcc1Q99LI2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcc1Q99LI2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Clcc1Q99LI2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcc1Q99LI2 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.66■□□□□ 0.9
Clcc1Q99LI2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.66■□□□□ 0.9
Clcc1Q99LI2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clcc1Q99LI2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clcc1Q99LI2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.65■□□□□ 0.9
Clcc1Q99LI2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.65■□□□□ 0.9
Clcc1Q99LI2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcc1Q99LI2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Clcc1Q99LI2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.65■□□□□ 0.9
Clcc1Q99LI2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcc1Q99LI2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcc1Q99LI2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clcc1Q99LI2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clcc1Q99LI2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clcc1Q99LI2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clcc1Q99LI2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcc1Q99LI2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.64■□□□□ 0.89
Clcc1Q99LI2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clcc1Q99LI2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clcc1Q99LI2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clcc1Q99LI2 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcc1Q99LI2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcc1Q99LI2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcc1Q99LI2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcc1Q99LI2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.63■□□□□ 0.89
Clcc1Q99LI2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.63■□□□□ 0.89
Clcc1Q99LI2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clcc1Q99LI2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcc1Q99LI2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcc1Q99LI2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clcc1Q99LI2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcc1Q99LI2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clcc1Q99LI2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcc1Q99LI2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcc1Q99LI2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.62■□□□□ 0.89
Clcc1Q99LI2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.62■□□□□ 0.89
Clcc1Q99LI2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Clcc1Q99LI2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcc1Q99LI2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clcc1Q99LI2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clcc1Q99LI2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcc1Q99LI2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.61■□□□□ 0.89
Clcc1Q99LI2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcc1Q99LI2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcc1Q99LI2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.61■□□□□ 0.89
Clcc1Q99LI2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clcc1Q99LI2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcc1Q99LI2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clcc1Q99LI2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcc1Q99LI2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcc1Q99LI2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clcc1Q99LI2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Clcc1Q99LI2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clcc1Q99LI2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcc1Q99LI2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clcc1Q99LI2 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.59■□□□□ 0.89
Clcc1Q99LI2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcc1Q99LI2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcc1Q99LI2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcc1Q99LI2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clcc1Q99LI2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clcc1Q99LI2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clcc1Q99LI2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Clcc1Q99LI2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.58■□□□□ 0.89
Clcc1Q99LI2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Clcc1Q99LI2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.58■□□□□ 0.89
Clcc1Q99LI2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
Clcc1Q99LI2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Clcc1Q99LI2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms