Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Hmgcs1Q8JZK9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Hmgcs1Q8JZK9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgcs1Q8JZK9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgcs1Q8JZK9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hmgcs1Q8JZK9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.94■□□□□ 0.78
Hmgcs1Q8JZK9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmgcs1Q8JZK9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hmgcs1Q8JZK9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgcs1Q8JZK9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hmgcs1Q8JZK9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgcs1Q8JZK9 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.92■□□□□ 0.78
Hmgcs1Q8JZK9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgcs1Q8JZK9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Hmgcs1Q8JZK9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hmgcs1Q8JZK9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgcs1Q8JZK9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgcs1Q8JZK9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgcs1Q8JZK9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgcs1Q8JZK9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hmgcs1Q8JZK9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.91■□□□□ 0.78
Hmgcs1Q8JZK9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgcs1Q8JZK9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hmgcs1Q8JZK9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Hmgcs1Q8JZK9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgcs1Q8JZK9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgcs1Q8JZK9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgcs1Q8JZK9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Hmgcs1Q8JZK9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgcs1Q8JZK9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmgcs1Q8JZK9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Hmgcs1Q8JZK9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgcs1Q8JZK9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgcs1Q8JZK9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgcs1Q8JZK9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Hmgcs1Q8JZK9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmgcs1Q8JZK9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Hmgcs1Q8JZK9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgcs1Q8JZK9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgcs1Q8JZK9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgcs1Q8JZK9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgcs1Q8JZK9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Hmgcs1Q8JZK9 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.89■□□□□ 0.77
Hmgcs1Q8JZK9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.89■□□□□ 0.77
Hmgcs1Q8JZK9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.89■□□□□ 0.77
Hmgcs1Q8JZK9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgcs1Q8JZK9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmgcs1Q8JZK9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Hmgcs1Q8JZK9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgcs1Q8JZK9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgcs1Q8JZK9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgcs1Q8JZK9 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.88■□□□□ 0.77
Hmgcs1Q8JZK9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgcs1Q8JZK9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmgcs1Q8JZK9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgcs1Q8JZK9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgcs1Q8JZK9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgcs1Q8JZK9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgcs1Q8JZK9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcs1Q8JZK9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcs1Q8JZK9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcs1Q8JZK9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcs1Q8JZK9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Hmgcs1Q8JZK9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcs1Q8JZK9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcs1Q8JZK9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgcs1Q8JZK9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgcs1Q8JZK9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
Hmgcs1Q8JZK9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgcs1Q8JZK9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Hmgcs1Q8JZK9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcs1Q8JZK9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcs1Q8JZK9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.84■□□□□ 0.77
Hmgcs1Q8JZK9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.84■□□□□ 0.77
Hmgcs1Q8JZK9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcs1Q8JZK9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcs1Q8JZK9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcs1Q8JZK9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcs1Q8JZK9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcs1Q8JZK9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Hmgcs1Q8JZK9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgcs1Q8JZK9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgcs1Q8JZK9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.83■□□□□ 0.77
Hmgcs1Q8JZK9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.83■□□□□ 0.77
Hmgcs1Q8JZK9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgcs1Q8JZK9 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgcs1Q8JZK9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hmgcs1Q8JZK9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgcs1Q8JZK9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hmgcs1Q8JZK9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgcs1Q8JZK9 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.82■□□□□ 0.76
Hmgcs1Q8JZK9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgcs1Q8JZK9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.82■□□□□ 0.76
Hmgcs1Q8JZK9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.82■□□□□ 0.76
Hmgcs1Q8JZK9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hmgcs1Q8JZK9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgcs1Q8JZK9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hmgcs1Q8JZK9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgcs1Q8JZK9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Hmgcs1Q8JZK9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms