Protein–RNA interactions for Protein: Q8CIG3

Kdm1b, Lysine-specific histone demethylase 1B, mousemouse

Predictions only

Length 826 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1bQ8CIG3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Kdm1bQ8CIG3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Kdm1bQ8CIG3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.79■■□□□ 1.08
Kdm1bQ8CIG3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.79■■□□□ 1.08
Kdm1bQ8CIG3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Kdm1bQ8CIG3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Kdm1bQ8CIG3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Kdm1bQ8CIG3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Kdm1bQ8CIG3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Kdm1bQ8CIG3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Kdm1bQ8CIG3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm1bQ8CIG3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm1bQ8CIG3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm1bQ8CIG3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm1bQ8CIG3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm1bQ8CIG3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm1bQ8CIG3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm1bQ8CIG3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm1bQ8CIG3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Kdm1bQ8CIG3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Kdm1bQ8CIG3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.77■■□□□ 1.07
Kdm1bQ8CIG3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm1bQ8CIG3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Kdm1bQ8CIG3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
Kdm1bQ8CIG3 Gm5921-201ENSMUST00000075898 882 ntBASIC21.76■■□□□ 1.07
Kdm1bQ8CIG3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm1bQ8CIG3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm1bQ8CIG3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm1bQ8CIG3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Kdm1bQ8CIG3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Kdm1bQ8CIG3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Kdm1bQ8CIG3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm1bQ8CIG3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Kdm1bQ8CIG3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.75■■□□□ 1.07
Kdm1bQ8CIG3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
Kdm1bQ8CIG3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Kdm1bQ8CIG3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm1bQ8CIG3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm1bQ8CIG3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Kdm1bQ8CIG3 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.74■■□□□ 1.07
Kdm1bQ8CIG3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Kdm1bQ8CIG3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm1bQ8CIG3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Kdm1bQ8CIG3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Kdm1bQ8CIG3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Kdm1bQ8CIG3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Kdm1bQ8CIG3 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Kdm1bQ8CIG3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Kdm1bQ8CIG3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.73■■□□□ 1.07
Kdm1bQ8CIG3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Kdm1bQ8CIG3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.72■■□□□ 1.07
Kdm1bQ8CIG3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Kdm1bQ8CIG3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Kdm1bQ8CIG3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Kdm1bQ8CIG3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Kdm1bQ8CIG3 Gm43566-201ENSMUST00000196851 808 ntBASIC21.72■■□□□ 1.07
Kdm1bQ8CIG3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Kdm1bQ8CIG3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Kdm1bQ8CIG3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Kdm1bQ8CIG3 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Kdm1bQ8CIG3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Kdm1bQ8CIG3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Kdm1bQ8CIG3 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Kdm1bQ8CIG3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Kdm1bQ8CIG3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.71■■□□□ 1.07
Kdm1bQ8CIG3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.71■■□□□ 1.07
Kdm1bQ8CIG3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Kdm1bQ8CIG3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Kdm1bQ8CIG3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Kdm1bQ8CIG3 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.69■■□□□ 1.06
Kdm1bQ8CIG3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Kdm1bQ8CIG3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Kdm1bQ8CIG3 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.69■■□□□ 1.06
Kdm1bQ8CIG3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.69■■□□□ 1.06
Kdm1bQ8CIG3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Kdm1bQ8CIG3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Kdm1bQ8CIG3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Kdm1bQ8CIG3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
Kdm1bQ8CIG3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Kdm1bQ8CIG3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Kdm1bQ8CIG3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Kdm1bQ8CIG3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Kdm1bQ8CIG3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Kdm1bQ8CIG3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.68■■□□□ 1.06
Kdm1bQ8CIG3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Kdm1bQ8CIG3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Kdm1bQ8CIG3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Kdm1bQ8CIG3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms