Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb7Q8CDY9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhb7Q8CDY9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb7Q8CDY9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb7Q8CDY9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb7Q8CDY9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb7Q8CDY9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb7Q8CDY9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb7Q8CDY9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.9■□□□□ 0.94
Pcdhb7Q8CDY9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.9■□□□□ 0.94
Pcdhb7Q8CDY9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb7Q8CDY9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb7Q8CDY9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb7Q8CDY9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb7Q8CDY9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb7Q8CDY9 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb7Q8CDY9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb7Q8CDY9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb7Q8CDY9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb7Q8CDY9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb7Q8CDY9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb7Q8CDY9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb7Q8CDY9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.88■□□□□ 0.93
Pcdhb7Q8CDY9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdhb7Q8CDY9 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.88■□□□□ 0.93
Pcdhb7Q8CDY9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb7Q8CDY9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb7Q8CDY9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb7Q8CDY9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb7Q8CDY9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb7Q8CDY9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pcdhb7Q8CDY9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhb7Q8CDY9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb7Q8CDY9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhb7Q8CDY9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb7Q8CDY9 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb7Q8CDY9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb7Q8CDY9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb7Q8CDY9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb7Q8CDY9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb7Q8CDY9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Pcdhb7Q8CDY9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb7Q8CDY9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb7Q8CDY9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb7Q8CDY9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb7Q8CDY9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pcdhb7Q8CDY9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb7Q8CDY9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb7Q8CDY9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdhb7Q8CDY9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb7Q8CDY9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.85■□□□□ 0.93
Pcdhb7Q8CDY9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.85■□□□□ 0.93
Pcdhb7Q8CDY9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb7Q8CDY9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb7Q8CDY9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb7Q8CDY9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb7Q8CDY9 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb7Q8CDY9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Pcdhb7Q8CDY9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb7Q8CDY9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb7Q8CDY9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdhb7Q8CDY9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb7Q8CDY9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb7Q8CDY9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb7Q8CDY9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb7Q8CDY9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.83■□□□□ 0.93
Pcdhb7Q8CDY9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdhb7Q8CDY9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb7Q8CDY9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb7Q8CDY9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Pcdhb7Q8CDY9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb7Q8CDY9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb7Q8CDY9 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.82■□□□□ 0.92
Pcdhb7Q8CDY9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb7Q8CDY9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Pcdhb7Q8CDY9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhb7Q8CDY9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb7Q8CDY9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb7Q8CDY9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhb7Q8CDY9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb7Q8CDY9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb7Q8CDY9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb7Q8CDY9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.81■□□□□ 0.92
Pcdhb7Q8CDY9 Gm5921-201ENSMUST00000075898 882 ntBASIC20.81■□□□□ 0.92
Pcdhb7Q8CDY9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb7Q8CDY9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb7Q8CDY9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb7Q8CDY9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb7Q8CDY9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb7Q8CDY9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb7Q8CDY9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb7Q8CDY9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb7Q8CDY9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb7Q8CDY9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb7Q8CDY9 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.79■□□□□ 0.92
Pcdhb7Q8CDY9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhb7Q8CDY9 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.78■□□□□ 0.92
Pcdhb7Q8CDY9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb7Q8CDY9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhb7Q8CDY9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms