Protein–RNA interactions for Protein: Q8CBF3

Ephb1, Ephrin type-B receptor 1, mousemouse

Predictions only

Length 984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb1Q8CBF3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Ephb1Q8CBF3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ephb1Q8CBF3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ephb1Q8CBF3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Ephb1Q8CBF3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.35■■□□□ 1.01
Ephb1Q8CBF3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ephb1Q8CBF3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ephb1Q8CBF3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ephb1Q8CBF3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ephb1Q8CBF3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ephb1Q8CBF3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ephb1Q8CBF3 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.34■■□□□ 1.01
Ephb1Q8CBF3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ephb1Q8CBF3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ephb1Q8CBF3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.34■■□□□ 1.01
Ephb1Q8CBF3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
Ephb1Q8CBF3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ephb1Q8CBF3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.34■■□□□ 1.01
Ephb1Q8CBF3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ephb1Q8CBF3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ephb1Q8CBF3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ephb1Q8CBF3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ephb1Q8CBF3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Ephb1Q8CBF3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ephb1Q8CBF3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Ephb1Q8CBF3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ephb1Q8CBF3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Ephb1Q8CBF3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ephb1Q8CBF3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ephb1Q8CBF3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ephb1Q8CBF3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ephb1Q8CBF3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ephb1Q8CBF3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ephb1Q8CBF3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ephb1Q8CBF3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ephb1Q8CBF3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ephb1Q8CBF3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Ephb1Q8CBF3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ephb1Q8CBF3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ephb1Q8CBF3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ephb1Q8CBF3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ephb1Q8CBF3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.31■■□□□ 1
Ephb1Q8CBF3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ephb1Q8CBF3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ephb1Q8CBF3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ephb1Q8CBF3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ephb1Q8CBF3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ephb1Q8CBF3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ephb1Q8CBF3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ephb1Q8CBF3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ephb1Q8CBF3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.3■■□□□ 1
Ephb1Q8CBF3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ephb1Q8CBF3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Ephb1Q8CBF3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ephb1Q8CBF3 Gm5812-201ENSMUST00000061073 957 ntBASIC21.29■■□□□ 1
Ephb1Q8CBF3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ephb1Q8CBF3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Ephb1Q8CBF3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
Ephb1Q8CBF3 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ephb1Q8CBF3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ephb1Q8CBF3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
Ephb1Q8CBF3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ephb1Q8CBF3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ephb1Q8CBF3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ephb1Q8CBF3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ephb1Q8CBF3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ephb1Q8CBF3 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.27■■□□□ 1
Ephb1Q8CBF3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ephb1Q8CBF3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ephb1Q8CBF3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Ephb1Q8CBF3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ephb1Q8CBF3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Ephb1Q8CBF3 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Gm15820-201ENSMUST00000201566 728 ntBASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Gm10232-201ENSMUST00000089221 720 ntBASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ephb1Q8CBF3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ephb1Q8CBF3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ephb1Q8CBF3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ephb1Q8CBF3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ephb1Q8CBF3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.25■□□□□ 0.99
Ephb1Q8CBF3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Ephb1Q8CBF3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.25■□□□□ 0.99
Ephb1Q8CBF3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.24■□□□□ 0.99
Ephb1Q8CBF3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ephb1Q8CBF3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ephb1Q8CBF3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms