Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc40Q8BI79 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc40Q8BI79 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ccdc40Q8BI79 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc40Q8BI79 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.64■■□□□ 1.06
Ccdc40Q8BI79 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
Ccdc40Q8BI79 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.64■■□□□ 1.05
Ccdc40Q8BI79 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc40Q8BI79 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc40Q8BI79 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc40Q8BI79 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc40Q8BI79 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc40Q8BI79 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc40Q8BI79 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc40Q8BI79 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc40Q8BI79 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc40Q8BI79 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc40Q8BI79 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc40Q8BI79 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc40Q8BI79 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc40Q8BI79 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc40Q8BI79 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc40Q8BI79 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc40Q8BI79 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc40Q8BI79 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc40Q8BI79 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.62■■□□□ 1.05
Ccdc40Q8BI79 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc40Q8BI79 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc40Q8BI79 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc40Q8BI79 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc40Q8BI79 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc40Q8BI79 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc40Q8BI79 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc40Q8BI79 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc40Q8BI79 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc40Q8BI79 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc40Q8BI79 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ccdc40Q8BI79 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc40Q8BI79 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc40Q8BI79 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc40Q8BI79 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.59■■□□□ 1.05
Ccdc40Q8BI79 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc40Q8BI79 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.59■■□□□ 1.05
Ccdc40Q8BI79 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc40Q8BI79 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc40Q8BI79 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc40Q8BI79 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc40Q8BI79 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc40Q8BI79 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc40Q8BI79 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc40Q8BI79 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc40Q8BI79 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc40Q8BI79 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc40Q8BI79 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc40Q8BI79 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.57■■□□□ 1.04
Ccdc40Q8BI79 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Ccdc40Q8BI79 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc40Q8BI79 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Ccdc40Q8BI79 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Ccdc40Q8BI79 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc40Q8BI79 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc40Q8BI79 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc40Q8BI79 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc40Q8BI79 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ccdc40Q8BI79 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.56■■□□□ 1.04
Ccdc40Q8BI79 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.56■■□□□ 1.04
Ccdc40Q8BI79 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc40Q8BI79 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc40Q8BI79 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.55■■□□□ 1.04
Ccdc40Q8BI79 Gm45444-201ENSMUST00000211394 898 ntBASIC21.55■■□□□ 1.04
Ccdc40Q8BI79 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.55■■□□□ 1.04
Ccdc40Q8BI79 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.55■■□□□ 1.04
Ccdc40Q8BI79 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc40Q8BI79 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc40Q8BI79 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Ccdc40Q8BI79 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
Ccdc40Q8BI79 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ccdc40Q8BI79 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc40Q8BI79 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.54■■□□□ 1.04
Ccdc40Q8BI79 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc40Q8BI79 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc40Q8BI79 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc40Q8BI79 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ccdc40Q8BI79 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.54■■□□□ 1.04
Ccdc40Q8BI79 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
Ccdc40Q8BI79 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ccdc40Q8BI79 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ccdc40Q8BI79 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc40Q8BI79 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc40Q8BI79 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc40Q8BI79 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.53■■□□□ 1.04
Ccdc40Q8BI79 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc40Q8BI79 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc40Q8BI79 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc40Q8BI79 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc40Q8BI79 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc40Q8BI79 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc40Q8BI79 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ccdc40Q8BI79 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.52■■□□□ 1.04
Ccdc40Q8BI79 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms