Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn3Q8BHH8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn3Q8BHH8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn3Q8BHH8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn3Q8BHH8 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn3Q8BHH8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Clrn3Q8BHH8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Clrn3Q8BHH8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn3Q8BHH8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Clrn3Q8BHH8 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.52■□□□□ 0.72
Clrn3Q8BHH8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.52■□□□□ 0.72
Clrn3Q8BHH8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn3Q8BHH8 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.52■□□□□ 0.72
Clrn3Q8BHH8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn3Q8BHH8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Clrn3Q8BHH8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Clrn3Q8BHH8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Clrn3Q8BHH8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.51■□□□□ 0.71
Clrn3Q8BHH8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn3Q8BHH8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Clrn3Q8BHH8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.51■□□□□ 0.71
Clrn3Q8BHH8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn3Q8BHH8 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn3Q8BHH8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Clrn3Q8BHH8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
Clrn3Q8BHH8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn3Q8BHH8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Clrn3Q8BHH8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn3Q8BHH8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn3Q8BHH8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn3Q8BHH8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn3Q8BHH8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.5■□□□□ 0.71
Clrn3Q8BHH8 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.5■□□□□ 0.71
Clrn3Q8BHH8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.5■□□□□ 0.71
Clrn3Q8BHH8 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.5■□□□□ 0.71
Clrn3Q8BHH8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn3Q8BHH8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn3Q8BHH8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Clrn3Q8BHH8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn3Q8BHH8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn3Q8BHH8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn3Q8BHH8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Clrn3Q8BHH8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.49■□□□□ 0.71
Clrn3Q8BHH8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn3Q8BHH8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn3Q8BHH8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn3Q8BHH8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn3Q8BHH8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Clrn3Q8BHH8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn3Q8BHH8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Clrn3Q8BHH8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Clrn3Q8BHH8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn3Q8BHH8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn3Q8BHH8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.48■□□□□ 0.71
Clrn3Q8BHH8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn3Q8BHH8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.48■□□□□ 0.71
Clrn3Q8BHH8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn3Q8BHH8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.47■□□□□ 0.71
Clrn3Q8BHH8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn3Q8BHH8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn3Q8BHH8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 Gm13238-201ENSMUST00000117655 780 ntBASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn3Q8BHH8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn3Q8BHH8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn3Q8BHH8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Clrn3Q8BHH8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn3Q8BHH8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn3Q8BHH8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn3Q8BHH8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Clrn3Q8BHH8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn3Q8BHH8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn3Q8BHH8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn3Q8BHH8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn3Q8BHH8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clrn3Q8BHH8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clrn3Q8BHH8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms