Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim23Q8BGX0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim23Q8BGX0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim23Q8BGX0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim23Q8BGX0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim23Q8BGX0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim23Q8BGX0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trim23Q8BGX0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.22■□□□□ 0.83
Trim23Q8BGX0 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim23Q8BGX0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim23Q8BGX0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim23Q8BGX0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trim23Q8BGX0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim23Q8BGX0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim23Q8BGX0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.21■□□□□ 0.83
Trim23Q8BGX0 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.21■□□□□ 0.83
Trim23Q8BGX0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim23Q8BGX0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim23Q8BGX0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim23Q8BGX0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim23Q8BGX0 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.19■□□□□ 0.82
Trim23Q8BGX0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim23Q8BGX0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim23Q8BGX0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim23Q8BGX0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim23Q8BGX0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim23Q8BGX0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim23Q8BGX0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim23Q8BGX0 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim23Q8BGX0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim23Q8BGX0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim23Q8BGX0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim23Q8BGX0 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.18■□□□□ 0.82
Trim23Q8BGX0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim23Q8BGX0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim23Q8BGX0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim23Q8BGX0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trim23Q8BGX0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim23Q8BGX0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim23Q8BGX0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim23Q8BGX0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Trim23Q8BGX0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim23Q8BGX0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim23Q8BGX0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim23Q8BGX0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.16■□□□□ 0.82
Trim23Q8BGX0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim23Q8BGX0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim23Q8BGX0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim23Q8BGX0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim23Q8BGX0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim23Q8BGX0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim23Q8BGX0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim23Q8BGX0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.15■□□□□ 0.82
Trim23Q8BGX0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim23Q8BGX0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim23Q8BGX0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim23Q8BGX0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim23Q8BGX0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim23Q8BGX0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim23Q8BGX0 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim23Q8BGX0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim23Q8BGX0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim23Q8BGX0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim23Q8BGX0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim23Q8BGX0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim23Q8BGX0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim23Q8BGX0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim23Q8BGX0 Gm22238-201ENSMUST00000175222 88 ntBASIC20.14■□□□□ 0.81
Trim23Q8BGX0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim23Q8BGX0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim23Q8BGX0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim23Q8BGX0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim23Q8BGX0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim23Q8BGX0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim23Q8BGX0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim23Q8BGX0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim23Q8BGX0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim23Q8BGX0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim23Q8BGX0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim23Q8BGX0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim23Q8BGX0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim23Q8BGX0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim23Q8BGX0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim23Q8BGX0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim23Q8BGX0 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.11■□□□□ 0.81
Trim23Q8BGX0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms