Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Samm50Q8BGH2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
Samm50Q8BGH2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Samm50Q8BGH2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Samm50Q8BGH2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Samm50Q8BGH2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.39■■□□□ 1.5
Samm50Q8BGH2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Samm50Q8BGH2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
Samm50Q8BGH2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC24.39■■□□□ 1.5
Samm50Q8BGH2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Samm50Q8BGH2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Samm50Q8BGH2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.39■■□□□ 1.49
Samm50Q8BGH2 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Samm50Q8BGH2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Samm50Q8BGH2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Samm50Q8BGH2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC24.38■■□□□ 1.49
Samm50Q8BGH2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Samm50Q8BGH2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Samm50Q8BGH2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Samm50Q8BGH2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Samm50Q8BGH2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Samm50Q8BGH2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC24.37■■□□□ 1.49
Samm50Q8BGH2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Samm50Q8BGH2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC24.37■■□□□ 1.49
Samm50Q8BGH2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Samm50Q8BGH2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Samm50Q8BGH2 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.37■■□□□ 1.49
Samm50Q8BGH2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Samm50Q8BGH2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Samm50Q8BGH2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Samm50Q8BGH2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Samm50Q8BGH2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Samm50Q8BGH2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Samm50Q8BGH2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Samm50Q8BGH2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Samm50Q8BGH2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.36■■□□□ 1.49
Samm50Q8BGH2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Samm50Q8BGH2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Samm50Q8BGH2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Samm50Q8BGH2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Samm50Q8BGH2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Samm50Q8BGH2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC24.36■■□□□ 1.49
Samm50Q8BGH2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Samm50Q8BGH2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC24.35■■□□□ 1.49
Samm50Q8BGH2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Samm50Q8BGH2 Notumos-201ENSMUST00000151998 2659 ntBASIC24.35■■□□□ 1.49
Samm50Q8BGH2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Samm50Q8BGH2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Samm50Q8BGH2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Samm50Q8BGH2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Samm50Q8BGH2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Samm50Q8BGH2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Samm50Q8BGH2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
Samm50Q8BGH2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Samm50Q8BGH2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Samm50Q8BGH2 Gm15546-201ENSMUST00000122095 826 ntBASIC24.33■■□□□ 1.49
Samm50Q8BGH2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC24.33■■□□□ 1.49
Samm50Q8BGH2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Samm50Q8BGH2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Samm50Q8BGH2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Samm50Q8BGH2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Samm50Q8BGH2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.32■■□□□ 1.48
Samm50Q8BGH2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Samm50Q8BGH2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Samm50Q8BGH2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Samm50Q8BGH2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Samm50Q8BGH2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Samm50Q8BGH2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Samm50Q8BGH2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.3■■□□□ 1.48
Samm50Q8BGH2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.3■■□□□ 1.48
Samm50Q8BGH2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Samm50Q8BGH2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Samm50Q8BGH2 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.3■■□□□ 1.48
Samm50Q8BGH2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.3■■□□□ 1.48
Samm50Q8BGH2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Samm50Q8BGH2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Samm50Q8BGH2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Samm50Q8BGH2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Samm50Q8BGH2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.29■■□□□ 1.48
Samm50Q8BGH2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC24.29■■□□□ 1.48
Samm50Q8BGH2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC24.29■■□□□ 1.48
Samm50Q8BGH2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Samm50Q8BGH2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Samm50Q8BGH2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Samm50Q8BGH2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Samm50Q8BGH2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Samm50Q8BGH2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Samm50Q8BGH2 Gm15820-201ENSMUST00000201566 728 ntBASIC24.28■■□□□ 1.48
Samm50Q8BGH2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.28■■□□□ 1.48
Samm50Q8BGH2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Samm50Q8BGH2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC24.28■■□□□ 1.48
Samm50Q8BGH2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Samm50Q8BGH2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Samm50Q8BGH2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Samm50Q8BGH2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Samm50Q8BGH2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
Samm50Q8BGH2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Samm50Q8BGH2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Samm50Q8BGH2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Samm50Q8BGH2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms