Protein–RNA interactions for Protein: Q80UY2

Kcmf1, E3 ubiquitin-protein ligase KCMF1, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcmf1Q80UY2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kcmf1Q80UY2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kcmf1Q80UY2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.73■□□□□ 0.75
Kcmf1Q80UY2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kcmf1Q80UY2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Kcmf1Q80UY2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Kcmf1Q80UY2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kcmf1Q80UY2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Kcmf1Q80UY2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kcmf1Q80UY2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Kcmf1Q80UY2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Kcmf1Q80UY2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcmf1Q80UY2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcmf1Q80UY2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcmf1Q80UY2 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.71■□□□□ 0.75
Kcmf1Q80UY2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcmf1Q80UY2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Kcmf1Q80UY2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcmf1Q80UY2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Kcmf1Q80UY2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcmf1Q80UY2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Kcmf1Q80UY2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Kcmf1Q80UY2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.7■□□□□ 0.74
Kcmf1Q80UY2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.7■□□□□ 0.74
Kcmf1Q80UY2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.7■□□□□ 0.74
Kcmf1Q80UY2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcmf1Q80UY2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcmf1Q80UY2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.7■□□□□ 0.74
Kcmf1Q80UY2 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.69■□□□□ 0.74
Kcmf1Q80UY2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.69■□□□□ 0.74
Kcmf1Q80UY2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcmf1Q80UY2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcmf1Q80UY2 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcmf1Q80UY2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcmf1Q80UY2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Kcmf1Q80UY2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcmf1Q80UY2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcmf1Q80UY2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.68■□□□□ 0.74
Kcmf1Q80UY2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcmf1Q80UY2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcmf1Q80UY2 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Kcmf1Q80UY2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Kcmf1Q80UY2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.67■□□□□ 0.74
Kcmf1Q80UY2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcmf1Q80UY2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcmf1Q80UY2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
Kcmf1Q80UY2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Kcmf1Q80UY2 Gm10399-202ENSMUST00000202768 748 ntBASIC19.67■□□□□ 0.74
Kcmf1Q80UY2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcmf1Q80UY2 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.67■□□□□ 0.74
Kcmf1Q80UY2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcmf1Q80UY2 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.67■□□□□ 0.74
Kcmf1Q80UY2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcmf1Q80UY2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Kcmf1Q80UY2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcmf1Q80UY2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Kcmf1Q80UY2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.66■□□□□ 0.74
Kcmf1Q80UY2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcmf1Q80UY2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcmf1Q80UY2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcmf1Q80UY2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcmf1Q80UY2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Kcmf1Q80UY2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Kcmf1Q80UY2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.64■□□□□ 0.74
Kcmf1Q80UY2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Kcmf1Q80UY2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kcmf1Q80UY2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.64■□□□□ 0.73
Kcmf1Q80UY2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Kcmf1Q80UY2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Kcmf1Q80UY2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kcmf1Q80UY2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kcmf1Q80UY2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Kcmf1Q80UY2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Kcmf1Q80UY2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Kcmf1Q80UY2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcmf1Q80UY2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcmf1Q80UY2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Kcmf1Q80UY2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcmf1Q80UY2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcmf1Q80UY2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcmf1Q80UY2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcmf1Q80UY2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Kcmf1Q80UY2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Kcmf1Q80UY2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Kcmf1Q80UY2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Kcmf1Q80UY2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Kcmf1Q80UY2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Kcmf1Q80UY2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.62■□□□□ 0.73
Kcmf1Q80UY2 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.62■□□□□ 0.73
Kcmf1Q80UY2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Kcmf1Q80UY2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Kcmf1Q80UY2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Kcmf1Q80UY2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Kcmf1Q80UY2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Kcmf1Q80UY2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Kcmf1Q80UY2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Kcmf1Q80UY2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.61■□□□□ 0.73
Kcmf1Q80UY2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Kcmf1Q80UY2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Kcmf1Q80UY2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms