Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Scube3Q66PY1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Scube3Q66PY1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Scube3Q66PY1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Scube3Q66PY1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Scube3Q66PY1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Scube3Q66PY1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC22■■□□□ 1.11
Scube3Q66PY1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Scube3Q66PY1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Scube3Q66PY1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Scube3Q66PY1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Scube3Q66PY1 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Scube3Q66PY1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.99■■□□□ 1.11
Scube3Q66PY1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.99■■□□□ 1.11
Scube3Q66PY1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scube3Q66PY1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scube3Q66PY1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Scube3Q66PY1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scube3Q66PY1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
Scube3Q66PY1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scube3Q66PY1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scube3Q66PY1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.98■■□□□ 1.11
Scube3Q66PY1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scube3Q66PY1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Scube3Q66PY1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Scube3Q66PY1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scube3Q66PY1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scube3Q66PY1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.97■■□□□ 1.11
Scube3Q66PY1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Scube3Q66PY1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scube3Q66PY1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.96■■□□□ 1.11
Scube3Q66PY1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
Scube3Q66PY1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.96■■□□□ 1.11
Scube3Q66PY1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scube3Q66PY1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scube3Q66PY1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.95■■□□□ 1.11
Scube3Q66PY1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scube3Q66PY1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scube3Q66PY1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scube3Q66PY1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scube3Q66PY1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Scube3Q66PY1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Scube3Q66PY1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.94■■□□□ 1.1
Scube3Q66PY1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scube3Q66PY1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Scube3Q66PY1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Scube3Q66PY1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scube3Q66PY1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.94■■□□□ 1.1
Scube3Q66PY1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scube3Q66PY1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Scube3Q66PY1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.93■■□□□ 1.1
Scube3Q66PY1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.93■■□□□ 1.1
Scube3Q66PY1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scube3Q66PY1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scube3Q66PY1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.92■■□□□ 1.1
Scube3Q66PY1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scube3Q66PY1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Scube3Q66PY1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scube3Q66PY1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Scube3Q66PY1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.91■■□□□ 1.1
Scube3Q66PY1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scube3Q66PY1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scube3Q66PY1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scube3Q66PY1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scube3Q66PY1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scube3Q66PY1 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scube3Q66PY1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scube3Q66PY1 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.9■■□□□ 1.1
Scube3Q66PY1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scube3Q66PY1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scube3Q66PY1 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scube3Q66PY1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Scube3Q66PY1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.89■■□□□ 1.1
Scube3Q66PY1 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Scube3Q66PY1 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Scube3Q66PY1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Scube3Q66PY1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.89■■□□□ 1.09
Scube3Q66PY1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.89■■□□□ 1.09
Scube3Q66PY1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Scube3Q66PY1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Scube3Q66PY1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
Scube3Q66PY1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Scube3Q66PY1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Scube3Q66PY1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scube3Q66PY1 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.88■■□□□ 1.09
Scube3Q66PY1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
Scube3Q66PY1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Scube3Q66PY1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.88■■□□□ 1.09
Scube3Q66PY1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Scube3Q66PY1 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.88■■□□□ 1.09
Scube3Q66PY1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scube3Q66PY1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scube3Q66PY1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scube3Q66PY1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Scube3Q66PY1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Scube3Q66PY1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Scube3Q66PY1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scube3Q66PY1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.87■■□□□ 1.09
Scube3Q66PY1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scube3Q66PY1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms