Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc3Q64519 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Sdc3Q64519 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc3Q64519 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc3Q64519 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc3Q64519 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.01■□□□□ 0.79
Sdc3Q64519 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc3Q64519 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc3Q64519 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Sdc3Q64519 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.01■□□□□ 0.79
Sdc3Q64519 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc3Q64519 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Sdc3Q64519 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc3Q64519 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc3Q64519 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20■□□□□ 0.79
Sdc3Q64519 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc3Q64519 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20■□□□□ 0.79
Sdc3Q64519 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc3Q64519 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc3Q64519 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Sdc3Q64519 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc3Q64519 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.99■□□□□ 0.79
Sdc3Q64519 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.99■□□□□ 0.79
Sdc3Q64519 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Sdc3Q64519 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.99■□□□□ 0.79
Sdc3Q64519 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Sdc3Q64519 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Sdc3Q64519 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc3Q64519 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Sdc3Q64519 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc3Q64519 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc3Q64519 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc3Q64519 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc3Q64519 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.98■□□□□ 0.79
Sdc3Q64519 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc3Q64519 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc3Q64519 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc3Q64519 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.98■□□□□ 0.79
Sdc3Q64519 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc3Q64519 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc3Q64519 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Sdc3Q64519 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.97■□□□□ 0.79
Sdc3Q64519 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.97■□□□□ 0.79
Sdc3Q64519 Gm10399-202ENSMUST00000202768 748 ntBASIC19.97■□□□□ 0.79
Sdc3Q64519 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc3Q64519 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc3Q64519 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc3Q64519 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.97■□□□□ 0.79
Sdc3Q64519 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc3Q64519 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc3Q64519 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc3Q64519 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc3Q64519 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.96■□□□□ 0.79
Sdc3Q64519 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc3Q64519 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.96■□□□□ 0.79
Sdc3Q64519 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc3Q64519 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc3Q64519 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdc3Q64519 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.95■□□□□ 0.78
Sdc3Q64519 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdc3Q64519 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.95■□□□□ 0.78
Sdc3Q64519 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc3Q64519 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc3Q64519 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc3Q64519 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc3Q64519 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc3Q64519 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc3Q64519 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc3Q64519 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc3Q64519 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc3Q64519 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc3Q64519 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc3Q64519 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sdc3Q64519 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc3Q64519 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc3Q64519 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc3Q64519 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc3Q64519 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.92■□□□□ 0.78
Sdc3Q64519 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.92■□□□□ 0.78
Sdc3Q64519 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Sdc3Q64519 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc3Q64519 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.92■□□□□ 0.78
Sdc3Q64519 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.92■□□□□ 0.78
Sdc3Q64519 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc3Q64519 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.91■□□□□ 0.78
Sdc3Q64519 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc3Q64519 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc3Q64519 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc3Q64519 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sdc3Q64519 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc3Q64519 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.91■□□□□ 0.78
Sdc3Q64519 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Sdc3Q64519 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.91■□□□□ 0.78
Sdc3Q64519 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc3Q64519 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc3Q64519 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc3Q64519 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc3Q64519 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc3Q64519 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.9■□□□□ 0.78
Sdc3Q64519 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms