Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pfdn4Q3UWL8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pfdn4Q3UWL8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pfdn4Q3UWL8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Pfdn4Q3UWL8 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.34■□□□□ 0.85
Pfdn4Q3UWL8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pfdn4Q3UWL8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pfdn4Q3UWL8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pfdn4Q3UWL8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.33■□□□□ 0.85
Pfdn4Q3UWL8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pfdn4Q3UWL8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pfdn4Q3UWL8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pfdn4Q3UWL8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pfdn4Q3UWL8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Pfdn4Q3UWL8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pfdn4Q3UWL8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pfdn4Q3UWL8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pfdn4Q3UWL8 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pfdn4Q3UWL8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pfdn4Q3UWL8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pfdn4Q3UWL8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pfdn4Q3UWL8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn4Q3UWL8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn4Q3UWL8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.31■□□□□ 0.84
Pfdn4Q3UWL8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn4Q3UWL8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn4Q3UWL8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn4Q3UWL8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn4Q3UWL8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn4Q3UWL8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn4Q3UWL8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn4Q3UWL8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pfdn4Q3UWL8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pfdn4Q3UWL8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn4Q3UWL8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn4Q3UWL8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn4Q3UWL8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn4Q3UWL8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Pfdn4Q3UWL8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn4Q3UWL8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn4Q3UWL8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn4Q3UWL8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pfdn4Q3UWL8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pfdn4Q3UWL8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pfdn4Q3UWL8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pfdn4Q3UWL8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.28■□□□□ 0.84
Pfdn4Q3UWL8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.28■□□□□ 0.84
Pfdn4Q3UWL8 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pfdn4Q3UWL8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.28■□□□□ 0.84
Pfdn4Q3UWL8 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pfdn4Q3UWL8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pfdn4Q3UWL8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn4Q3UWL8 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn4Q3UWL8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn4Q3UWL8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.27■□□□□ 0.84
Pfdn4Q3UWL8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn4Q3UWL8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn4Q3UWL8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pfdn4Q3UWL8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Pfdn4Q3UWL8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Pfdn4Q3UWL8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Pfdn4Q3UWL8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Pfdn4Q3UWL8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Pfdn4Q3UWL8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pfdn4Q3UWL8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pfdn4Q3UWL8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pfdn4Q3UWL8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pfdn4Q3UWL8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pfdn4Q3UWL8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pfdn4Q3UWL8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn4Q3UWL8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pfdn4Q3UWL8 Gm11175-201ENSMUST00000116172 543 ntBASIC20.25■□□□□ 0.83
Pfdn4Q3UWL8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.25■□□□□ 0.83
Pfdn4Q3UWL8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Pfdn4Q3UWL8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn4Q3UWL8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn4Q3UWL8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn4Q3UWL8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn4Q3UWL8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pfdn4Q3UWL8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pfdn4Q3UWL8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pfdn4Q3UWL8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pfdn4Q3UWL8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pfdn4Q3UWL8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pfdn4Q3UWL8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pfdn4Q3UWL8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pfdn4Q3UWL8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms