Protein–RNA interactions for Protein: P63054

Pcp4, Calmodulin regulator protein PCP4, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4P63054 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcp4P63054 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcp4P63054 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcp4P63054 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcp4P63054 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcp4P63054 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcp4P63054 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcp4P63054 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcp4P63054 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcp4P63054 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcp4P63054 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Pcp4P63054 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcp4P63054 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.31□□□□□ -0.12
Pcp4P63054 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Pcp4P63054 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcp4P63054 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcp4P63054 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcp4P63054 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcp4P63054 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcp4P63054 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Pcp4P63054 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.31□□□□□ -0.12
Pcp4P63054 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcp4P63054 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcp4P63054 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcp4P63054 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcp4P63054 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcp4P63054 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcp4P63054 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcp4P63054 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcp4P63054 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcp4P63054 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcp4P63054 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcp4P63054 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcp4P63054 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcp4P63054 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcp4P63054 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcp4P63054 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcp4P63054 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcp4P63054 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcp4P63054 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcp4P63054 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcp4P63054 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcp4P63054 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcp4P63054 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcp4P63054 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.29□□□□□ -0.12
Pcp4P63054 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcp4P63054 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcp4P63054 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.29□□□□□ -0.12
Pcp4P63054 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcp4P63054 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcp4P63054 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pcp4P63054 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcp4P63054 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcp4P63054 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcp4P63054 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcp4P63054 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcp4P63054 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcp4P63054 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcp4P63054 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcp4P63054 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcp4P63054 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcp4P63054 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcp4P63054 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcp4P63054 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcp4P63054 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcp4P63054 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcp4P63054 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcp4P63054 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcp4P63054 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcp4P63054 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Pcp4P63054 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Pcp4P63054 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcp4P63054 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
Pcp4P63054 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcp4P63054 Golph3-205ENSMUST00000228671 2842 ntBASIC14.27□□□□□ -0.13
Pcp4P63054 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcp4P63054 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcp4P63054 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcp4P63054 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcp4P63054 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcp4P63054 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcp4P63054 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcp4P63054 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcp4P63054 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcp4P63054 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcp4P63054 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcp4P63054 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pcp4P63054 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcp4P63054 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcp4P63054 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcp4P63054 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcp4P63054 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcp4P63054 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcp4P63054 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcp4P63054 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcp4P63054 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcp4P63054 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcp4P63054 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcp4P63054 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcp4P63054 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms