Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ube2d3P61079 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube2d3P61079 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ube2d3P61079 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ube2d3P61079 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube2d3P61079 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ube2d3P61079 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube2d3P61079 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ube2d3P61079 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube2d3P61079 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ube2d3P61079 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.88□□□□□ -0.03
Ube2d3P61079 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube2d3P61079 Gm11175-201ENSMUST00000116172 543 ntBASIC14.88□□□□□ -0.03
Ube2d3P61079 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube2d3P61079 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC14.88□□□□□ -0.03
Ube2d3P61079 Gm8093-201ENSMUST00000128935 1892 ntBASIC14.88□□□□□ -0.03
Ube2d3P61079 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube2d3P61079 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ube2d3P61079 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ube2d3P61079 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube2d3P61079 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC14.87□□□□□ -0.03
Ube2d3P61079 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube2d3P61079 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube2d3P61079 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube2d3P61079 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC14.87□□□□□ -0.03
Ube2d3P61079 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.87□□□□□ -0.03
Ube2d3P61079 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube2d3P61079 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube2d3P61079 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube2d3P61079 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube2d3P61079 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube2d3P61079 Gm7332-201ENSMUST00000118351 454 ntBASIC14.86□□□□□ -0.03
Ube2d3P61079 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.86□□□□□ -0.03
Ube2d3P61079 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.86□□□□□ -0.03
Ube2d3P61079 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ube2d3P61079 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ube2d3P61079 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube2d3P61079 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.85□□□□□ -0.03
Ube2d3P61079 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.85□□□□□ -0.03
Ube2d3P61079 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube2d3P61079 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube2d3P61079 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube2d3P61079 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube2d3P61079 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ube2d3P61079 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube2d3P61079 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.84□□□□□ -0.03
Ube2d3P61079 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ube2d3P61079 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.84□□□□□ -0.03
Ube2d3P61079 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ube2d3P61079 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube2d3P61079 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube2d3P61079 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ube2d3P61079 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ube2d3P61079 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ube2d3P61079 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ube2d3P61079 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube2d3P61079 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube2d3P61079 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube2d3P61079 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ube2d3P61079 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube2d3P61079 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube2d3P61079 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.83□□□□□ -0.04
Ube2d3P61079 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube2d3P61079 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube2d3P61079 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube2d3P61079 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube2d3P61079 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube2d3P61079 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube2d3P61079 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube2d3P61079 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Ube2d3P61079 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ube2d3P61079 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ube2d3P61079 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube2d3P61079 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube2d3P61079 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ube2d3P61079 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube2d3P61079 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ube2d3P61079 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube2d3P61079 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.82□□□□□ -0.04
Ube2d3P61079 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ube2d3P61079 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Ube2d3P61079 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube2d3P61079 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube2d3P61079 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube2d3P61079 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube2d3P61079 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube2d3P61079 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ube2d3P61079 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms