Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup43P59235 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup43P59235 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nup43P59235 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup43P59235 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup43P59235 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup43P59235 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Nup43P59235 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup43P59235 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup43P59235 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.77■□□□□ 0.76
Nup43P59235 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.77■□□□□ 0.76
Nup43P59235 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Nup43P59235 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup43P59235 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.76■□□□□ 0.75
Nup43P59235 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup43P59235 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup43P59235 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nup43P59235 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup43P59235 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup43P59235 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup43P59235 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup43P59235 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nup43P59235 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nup43P59235 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup43P59235 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup43P59235 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup43P59235 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.75■□□□□ 0.75
Nup43P59235 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup43P59235 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nup43P59235 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup43P59235 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup43P59235 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.74■□□□□ 0.75
Nup43P59235 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.74■□□□□ 0.75
Nup43P59235 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup43P59235 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup43P59235 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup43P59235 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nup43P59235 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nup43P59235 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup43P59235 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.74■□□□□ 0.75
Nup43P59235 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup43P59235 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup43P59235 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.73■□□□□ 0.75
Nup43P59235 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup43P59235 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup43P59235 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup43P59235 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Nup43P59235 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.72■□□□□ 0.75
Nup43P59235 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.72■□□□□ 0.75
Nup43P59235 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nup43P59235 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.72■□□□□ 0.75
Nup43P59235 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.72■□□□□ 0.75
Nup43P59235 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup43P59235 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup43P59235 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup43P59235 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.72■□□□□ 0.75
Nup43P59235 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup43P59235 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup43P59235 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.71■□□□□ 0.75
Nup43P59235 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.71■□□□□ 0.75
Nup43P59235 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.71■□□□□ 0.75
Nup43P59235 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Nup43P59235 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup43P59235 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nup43P59235 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup43P59235 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup43P59235 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup43P59235 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup43P59235 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup43P59235 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nup43P59235 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.7■□□□□ 0.74
Nup43P59235 Gm40881-201ENSMUST00000223397 166 ntBASIC19.7■□□□□ 0.74
Nup43P59235 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup43P59235 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup43P59235 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup43P59235 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nup43P59235 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Nup43P59235 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.69■□□□□ 0.74
Nup43P59235 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.69■□□□□ 0.74
Nup43P59235 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.69■□□□□ 0.74
Nup43P59235 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup43P59235 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup43P59235 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup43P59235 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup43P59235 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.68■□□□□ 0.74
Nup43P59235 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup43P59235 Gm9959-201ENSMUST00000068277 390 ntBASIC19.68■□□□□ 0.74
Nup43P59235 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup43P59235 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Nup43P59235 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nup43P59235 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup43P59235 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup43P59235 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nup43P59235 Etf1-202ENSMUST00000180351 108 ntBASIC19.67■□□□□ 0.74
Nup43P59235 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nup43P59235 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup43P59235 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup43P59235 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nup43P59235 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup43P59235 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms