Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli1P47806 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Gli1P47806 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli1P47806 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Gli1P47806 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.26■□□□□ 0.83
Gli1P47806 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli1P47806 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli1P47806 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli1P47806 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli1P47806 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gli1P47806 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli1P47806 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli1P47806 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli1P47806 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gli1P47806 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gli1P47806 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli1P47806 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gli1P47806 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli1P47806 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli1P47806 Gm43566-201ENSMUST00000196851 808 ntBASIC20.25■□□□□ 0.83
Gli1P47806 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.25■□□□□ 0.83
Gli1P47806 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gli1P47806 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Gli1P47806 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Gli1P47806 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.24■□□□□ 0.83
Gli1P47806 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gli1P47806 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gli1P47806 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gli1P47806 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Gli1P47806 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gli1P47806 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
Gli1P47806 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.24■□□□□ 0.83
Gli1P47806 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
Gli1P47806 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Gli1P47806 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.23■□□□□ 0.83
Gli1P47806 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gli1P47806 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gli1P47806 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gli1P47806 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.23■□□□□ 0.83
Gli1P47806 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gli1P47806 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
Gli1P47806 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gli1P47806 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gli1P47806 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Gli1P47806 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gli1P47806 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gli1P47806 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gli1P47806 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gli1P47806 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gli1P47806 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gli1P47806 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gli1P47806 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.21■□□□□ 0.83
Gli1P47806 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gli1P47806 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.21■□□□□ 0.83
Gli1P47806 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gli1P47806 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gli1P47806 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gli1P47806 Gm14117-201ENSMUST00000122417 843 ntBASIC20.2■□□□□ 0.82
Gli1P47806 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.2■□□□□ 0.82
Gli1P47806 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.2■□□□□ 0.82
Gli1P47806 Gm45444-201ENSMUST00000211394 898 ntBASIC20.2■□□□□ 0.82
Gli1P47806 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.2■□□□□ 0.82
Gli1P47806 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gli1P47806 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.19■□□□□ 0.82
Gli1P47806 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gli1P47806 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gli1P47806 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gli1P47806 Gm45102-201ENSMUST00000207427 857 ntBASIC20.19■□□□□ 0.82
Gli1P47806 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gli1P47806 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Gli1P47806 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.18■□□□□ 0.82
Gli1P47806 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Gli1P47806 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gli1P47806 Notumos-201ENSMUST00000151998 2659 ntBASIC20.18■□□□□ 0.82
Gli1P47806 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gli1P47806 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gli1P47806 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gli1P47806 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Gli1P47806 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gli1P47806 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gli1P47806 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Gli1P47806 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gli1P47806 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gli1P47806 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Gli1P47806 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.17■□□□□ 0.82
Gli1P47806 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gli1P47806 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gli1P47806 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gli1P47806 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gli1P47806 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gli1P47806 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.16■□□□□ 0.82
Gli1P47806 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gli1P47806 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gli1P47806 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gli1P47806 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gli1P47806 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Gli1P47806 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.15■□□□□ 0.82
Gli1P47806 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gli1P47806 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gli1P47806 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms