Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1aP43275 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1aP43275 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1aP43275 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Hist1h1aP43275 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Hist1h1aP43275 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1aP43275 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1aP43275 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1aP43275 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.13■□□□□ 0.33
Hist1h1aP43275 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1aP43275 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1aP43275 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1aP43275 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1aP43275 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1aP43275 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1aP43275 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1aP43275 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1aP43275 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1aP43275 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hist1h1aP43275 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h1aP43275 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.11■□□□□ 0.33
Hist1h1aP43275 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h1aP43275 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
Hist1h1aP43275 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.11■□□□□ 0.33
Hist1h1aP43275 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.11■□□□□ 0.33
Hist1h1aP43275 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.11■□□□□ 0.33
Hist1h1aP43275 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h1aP43275 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1aP43275 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1aP43275 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1aP43275 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hist1h1aP43275 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1aP43275 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1aP43275 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1aP43275 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1aP43275 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Hist1h1aP43275 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1aP43275 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1aP43275 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1aP43275 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1aP43275 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Hist1h1aP43275 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Hist1h1aP43275 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1aP43275 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1aP43275 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Hist1h1aP43275 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1aP43275 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1aP43275 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1aP43275 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Hist1h1aP43275 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1aP43275 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1aP43275 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hist1h1aP43275 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Hist1h1aP43275 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Hist1h1aP43275 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.08■□□□□ 0.33
Hist1h1aP43275 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1aP43275 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1aP43275 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1aP43275 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1aP43275 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1aP43275 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Hist1h1aP43275 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1aP43275 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h1aP43275 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h1aP43275 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h1aP43275 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h1aP43275 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Hist1h1aP43275 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h1aP43275 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h1aP43275 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1aP43275 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1aP43275 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1aP43275 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1aP43275 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1aP43275 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1aP43275 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1aP43275 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1aP43275 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Hist1h1aP43275 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hist1h1aP43275 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1aP43275 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hist1h1aP43275 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1aP43275 Iqck-206ENSMUST00000208658 2891 ntBASIC17.05■□□□□ 0.32
Hist1h1aP43275 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1aP43275 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hist1h1aP43275 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1aP43275 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1aP43275 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1aP43275 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1aP43275 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1aP43275 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1aP43275 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.04■□□□□ 0.32
Hist1h1aP43275 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1aP43275 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.04■□□□□ 0.32
Hist1h1aP43275 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1aP43275 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.04■□□□□ 0.32
Hist1h1aP43275 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1aP43275 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1aP43275 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Hist1h1aP43275 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms