Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rab3dP35276 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rab3dP35276 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.39■□□□□ 0.37
Rab3dP35276 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.39■□□□□ 0.37
Rab3dP35276 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab3dP35276 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab3dP35276 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab3dP35276 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab3dP35276 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab3dP35276 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab3dP35276 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab3dP35276 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab3dP35276 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rab3dP35276 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab3dP35276 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rab3dP35276 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab3dP35276 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rab3dP35276 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab3dP35276 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab3dP35276 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab3dP35276 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rab3dP35276 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.37■□□□□ 0.37
Rab3dP35276 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.37■□□□□ 0.37
Rab3dP35276 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab3dP35276 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab3dP35276 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab3dP35276 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab3dP35276 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab3dP35276 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab3dP35276 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rab3dP35276 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab3dP35276 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab3dP35276 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab3dP35276 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab3dP35276 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rab3dP35276 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.36■□□□□ 0.37
Rab3dP35276 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.36■□□□□ 0.37
Rab3dP35276 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab3dP35276 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Rab3dP35276 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab3dP35276 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab3dP35276 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab3dP35276 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab3dP35276 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rab3dP35276 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rab3dP35276 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab3dP35276 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rab3dP35276 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab3dP35276 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.35■□□□□ 0.37
Rab3dP35276 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab3dP35276 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rab3dP35276 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab3dP35276 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rab3dP35276 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rab3dP35276 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab3dP35276 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.35■□□□□ 0.37
Rab3dP35276 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab3dP35276 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rab3dP35276 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rab3dP35276 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab3dP35276 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rab3dP35276 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab3dP35276 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.34■□□□□ 0.37
Rab3dP35276 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.34■□□□□ 0.37
Rab3dP35276 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab3dP35276 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rab3dP35276 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rab3dP35276 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Rab3dP35276 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.33■□□□□ 0.37
Rab3dP35276 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.33■□□□□ 0.37
Rab3dP35276 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Rab3dP35276 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Rab3dP35276 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab3dP35276 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Rab3dP35276 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab3dP35276 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab3dP35276 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab3dP35276 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab3dP35276 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab3dP35276 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab3dP35276 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab3dP35276 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rab3dP35276 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Rab3dP35276 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab3dP35276 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab3dP35276 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab3dP35276 Gm44428-201ENSMUST00000204474 874 ntBASIC17.32■□□□□ 0.36
Rab3dP35276 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.32■□□□□ 0.36
Rab3dP35276 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab3dP35276 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab3dP35276 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab3dP35276 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab3dP35276 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rab3dP35276 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Rab3dP35276 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rab3dP35276 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab3dP35276 Gm8503-201ENSMUST00000118131 455 ntBASIC17.31■□□□□ 0.36
Rab3dP35276 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rab3dP35276 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab3dP35276 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms