Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
BrafP28028 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BrafP28028 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BrafP28028 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BrafP28028 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BrafP28028 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
BrafP28028 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.3■□□□□ 0.84
BrafP28028 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
BrafP28028 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
BrafP28028 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BrafP28028 Iqck-206ENSMUST00000208658 2891 ntBASIC20.29■□□□□ 0.84
BrafP28028 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BrafP28028 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
BrafP28028 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BrafP28028 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.29■□□□□ 0.84
BrafP28028 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
BrafP28028 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.28■□□□□ 0.84
BrafP28028 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
BrafP28028 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
BrafP28028 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
BrafP28028 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
BrafP28028 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BrafP28028 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BrafP28028 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BrafP28028 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BrafP28028 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.27■□□□□ 0.84
BrafP28028 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
BrafP28028 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.27■□□□□ 0.83
BrafP28028 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
BrafP28028 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BrafP28028 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BrafP28028 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BrafP28028 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
BrafP28028 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.26■□□□□ 0.83
BrafP28028 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.26■□□□□ 0.83
BrafP28028 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BrafP28028 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BrafP28028 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BrafP28028 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
BrafP28028 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.25■□□□□ 0.83
BrafP28028 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BrafP28028 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BrafP28028 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BrafP28028 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BrafP28028 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
BrafP28028 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BrafP28028 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BrafP28028 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BrafP28028 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.24■□□□□ 0.83
BrafP28028 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BrafP28028 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
BrafP28028 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.24■□□□□ 0.83
BrafP28028 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
BrafP28028 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BrafP28028 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.23■□□□□ 0.83
BrafP28028 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BrafP28028 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
BrafP28028 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.23■□□□□ 0.83
BrafP28028 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
BrafP28028 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
BrafP28028 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BrafP28028 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BrafP28028 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BrafP28028 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
BrafP28028 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
BrafP28028 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
BrafP28028 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
BrafP28028 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.21■□□□□ 0.83
BrafP28028 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
BrafP28028 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BrafP28028 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
BrafP28028 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BrafP28028 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
BrafP28028 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
BrafP28028 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BrafP28028 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
BrafP28028 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BrafP28028 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
BrafP28028 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
BrafP28028 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
BrafP28028 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.2■□□□□ 0.82
BrafP28028 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
BrafP28028 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BrafP28028 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
BrafP28028 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BrafP28028 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
BrafP28028 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
BrafP28028 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
BrafP28028 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BrafP28028 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.19■□□□□ 0.82
BrafP28028 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
BrafP28028 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.19■□□□□ 0.82
BrafP28028 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
BrafP28028 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.19■□□□□ 0.82
BrafP28028 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BrafP28028 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.18■□□□□ 0.82
BrafP28028 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.18■□□□□ 0.82
BrafP28028 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
BrafP28028 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
BrafP28028 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms