Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.9■□□□□ 0.62
TpbpaP13438 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TpbpaP13438 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TpbpaP13438 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TpbpaP13438 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TpbpaP13438 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TpbpaP13438 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TpbpaP13438 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TpbpaP13438 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TpbpaP13438 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
TpbpaP13438 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TpbpaP13438 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TpbpaP13438 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TpbpaP13438 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TpbpaP13438 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TpbpaP13438 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TpbpaP13438 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
TpbpaP13438 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
TpbpaP13438 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TpbpaP13438 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TpbpaP13438 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TpbpaP13438 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TpbpaP13438 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TpbpaP13438 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TpbpaP13438 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.88■□□□□ 0.61
TpbpaP13438 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TpbpaP13438 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.88■□□□□ 0.61
TpbpaP13438 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TpbpaP13438 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TpbpaP13438 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TpbpaP13438 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TpbpaP13438 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TpbpaP13438 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TpbpaP13438 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TpbpaP13438 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TpbpaP13438 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TpbpaP13438 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TpbpaP13438 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TpbpaP13438 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TpbpaP13438 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TpbpaP13438 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TpbpaP13438 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.87■□□□□ 0.61
TpbpaP13438 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TpbpaP13438 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TpbpaP13438 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.86■□□□□ 0.61
TpbpaP13438 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TpbpaP13438 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.86■□□□□ 0.61
TpbpaP13438 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TpbpaP13438 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TpbpaP13438 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.85■□□□□ 0.61
TpbpaP13438 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TpbpaP13438 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.85■□□□□ 0.61
TpbpaP13438 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TpbpaP13438 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TpbpaP13438 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TpbpaP13438 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TpbpaP13438 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.84■□□□□ 0.61
TpbpaP13438 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TpbpaP13438 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.84■□□□□ 0.61
TpbpaP13438 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TpbpaP13438 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TpbpaP13438 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TpbpaP13438 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TpbpaP13438 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TpbpaP13438 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.83■□□□□ 0.6
TpbpaP13438 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TpbpaP13438 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.83■□□□□ 0.6
TpbpaP13438 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TpbpaP13438 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TpbpaP13438 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TpbpaP13438 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TpbpaP13438 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TpbpaP13438 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TpbpaP13438 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TpbpaP13438 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TpbpaP13438 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TpbpaP13438 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TpbpaP13438 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TpbpaP13438 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TpbpaP13438 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TpbpaP13438 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TpbpaP13438 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TpbpaP13438 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TpbpaP13438 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TpbpaP13438 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TpbpaP13438 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TpbpaP13438 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TpbpaP13438 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 151.8 ms