Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nid1P10493 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nid1P10493 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.66■□□□□ 0.74
Nid1P10493 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nid1P10493 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nid1P10493 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.66■□□□□ 0.74
Nid1P10493 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nid1P10493 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nid1P10493 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nid1P10493 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nid1P10493 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.66■□□□□ 0.74
Nid1P10493 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nid1P10493 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nid1P10493 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.65■□□□□ 0.74
Nid1P10493 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nid1P10493 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nid1P10493 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nid1P10493 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nid1P10493 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nid1P10493 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid1P10493 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid1P10493 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid1P10493 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid1P10493 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nid1P10493 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid1P10493 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nid1P10493 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Nid1P10493 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid1P10493 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.63■□□□□ 0.73
Nid1P10493 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nid1P10493 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Nid1P10493 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid1P10493 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid1P10493 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid1P10493 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nid1P10493 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.63■□□□□ 0.73
Nid1P10493 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nid1P10493 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid1P10493 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid1P10493 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid1P10493 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid1P10493 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid1P10493 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nid1P10493 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Nid1P10493 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nid1P10493 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid1P10493 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid1P10493 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.62■□□□□ 0.73
Nid1P10493 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid1P10493 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid1P10493 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Nid1P10493 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid1P10493 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid1P10493 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nid1P10493 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid1P10493 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.61■□□□□ 0.73
Nid1P10493 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nid1P10493 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.61■□□□□ 0.73
Nid1P10493 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nid1P10493 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid1P10493 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid1P10493 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nid1P10493 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nid1P10493 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid1P10493 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid1P10493 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid1P10493 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid1P10493 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid1P10493 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid1P10493 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid1P10493 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid1P10493 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Nid1P10493 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid1P10493 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Nid1P10493 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Nid1P10493 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.6■□□□□ 0.73
Nid1P10493 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.6■□□□□ 0.73
Nid1P10493 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.6■□□□□ 0.73
Nid1P10493 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nid1P10493 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid1P10493 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.59■□□□□ 0.73
Nid1P10493 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid1P10493 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Nid1P10493 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid1P10493 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nid1P10493 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nid1P10493 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nid1P10493 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nid1P10493 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.58■□□□□ 0.72
Nid1P10493 Gm45444-201ENSMUST00000211394 898 ntBASIC19.58■□□□□ 0.72
Nid1P10493 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.58■□□□□ 0.72
Nid1P10493 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid1P10493 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nid1P10493 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nid1P10493 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.72
Nid1P10493 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nid1P10493 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nid1P10493 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nid1P10493 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nid1P10493 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms