Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa4P06798 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa4P06798 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa4P06798 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa4P06798 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hoxa4P06798 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa4P06798 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa4P06798 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.72■□□□□ 0.91
Hoxa4P06798 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa4P06798 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa4P06798 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa4P06798 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hoxa4P06798 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa4P06798 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa4P06798 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.71■□□□□ 0.91
Hoxa4P06798 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa4P06798 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Hoxa4P06798 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.71■□□□□ 0.91
Hoxa4P06798 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa4P06798 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa4P06798 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa4P06798 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hoxa4P06798 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hoxa4P06798 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa4P06798 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.7■□□□□ 0.9
Hoxa4P06798 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa4P06798 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hoxa4P06798 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxa4P06798 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa4P06798 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hoxa4P06798 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.69■□□□□ 0.9
Hoxa4P06798 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa4P06798 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa4P06798 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa4P06798 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hoxa4P06798 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa4P06798 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa4P06798 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa4P06798 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa4P06798 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa4P06798 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa4P06798 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Hoxa4P06798 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa4P06798 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa4P06798 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
Hoxa4P06798 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.66■□□□□ 0.9
Hoxa4P06798 Gm22238-201ENSMUST00000175222 88 ntBASIC20.66■□□□□ 0.9
Hoxa4P06798 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa4P06798 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa4P06798 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa4P06798 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Hoxa4P06798 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Hoxa4P06798 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxa4P06798 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.65■□□□□ 0.9
Hoxa4P06798 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hoxa4P06798 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.65■□□□□ 0.9
Hoxa4P06798 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hoxa4P06798 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Hoxa4P06798 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.65■□□□□ 0.9
Hoxa4P06798 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
Hoxa4P06798 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.64■□□□□ 0.9
Hoxa4P06798 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hoxa4P06798 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Hoxa4P06798 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxa4P06798 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxa4P06798 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxa4P06798 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxa4P06798 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hoxa4P06798 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa4P06798 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.63■□□□□ 0.89
Hoxa4P06798 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa4P06798 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa4P06798 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa4P06798 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hoxa4P06798 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa4P06798 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.62■□□□□ 0.89
Hoxa4P06798 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa4P06798 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa4P06798 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.62■□□□□ 0.89
Hoxa4P06798 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa4P06798 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hoxa4P06798 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.61■□□□□ 0.89
Hoxa4P06798 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hoxa4P06798 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxa4P06798 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxa4P06798 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxa4P06798 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Hoxa4P06798 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxa4P06798 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.6■□□□□ 0.89
Hoxa4P06798 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.6■□□□□ 0.89
Hoxa4P06798 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxa4P06798 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxa4P06798 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hoxa4P06798 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.6■□□□□ 0.89
Hoxa4P06798 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxa4P06798 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hoxa4P06798 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hoxa4P06798 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.59■□□□□ 0.89
Hoxa4P06798 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
Hoxa4P06798 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms