Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.66■□□□□ 0.58
P06344 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P06344 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P06344 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P06344 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P06344 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06344 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06344 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06344 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06344 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P06344 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P06344 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.65■□□□□ 0.58
P06344 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
P06344 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.65■□□□□ 0.58
P06344 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.65■□□□□ 0.58
P06344 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.65■□□□□ 0.58
P06344 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06344 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.65■□□□□ 0.58
P06344 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P06344 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
P06344 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
P06344 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
P06344 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
P06344 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
P06344 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P06344 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
P06344 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
P06344 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
P06344 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06344 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.63■□□□□ 0.57
P06344 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P06344 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.63■□□□□ 0.57
P06344 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06344 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.63■□□□□ 0.57
P06344 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06344 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06344 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06344 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
P06344 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
P06344 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06344 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P06344 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06344 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.62■□□□□ 0.57
P06344 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
P06344 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06344 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06344 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06344 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P06344 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06344 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P06344 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06344 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06344 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P06344 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
P06344 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
P06344 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P06344 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.61■□□□□ 0.57
P06344 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P06344 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P06344 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P06344 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P06344 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.6■□□□□ 0.57
P06344 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
P06344 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
P06344 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
P06344 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.6■□□□□ 0.57
P06344 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
P06344 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P06344 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P06344 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P06344 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P06344 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
P06344 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P06344 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P06344 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P06344 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
P06344 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P06344 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P06344 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
P06344 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P06344 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P06344 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.58■□□□□ 0.56
P06344 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.58■□□□□ 0.56
P06344 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.58■□□□□ 0.56
P06344 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
P06344 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.58■□□□□ 0.56
P06344 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P06344 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
P06344 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
P06344 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P06344 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
P06344 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P06344 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
P06344 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P06344 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06344 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06344 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
P06344 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.57■□□□□ 0.56
P06344 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
P06344 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms