Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
P06336 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
P06336 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
P06336 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06336 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06336 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06336 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06336 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06336 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06336 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06336 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.3■□□□□ 0.68
P06336 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06336 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06336 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06336 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
P06336 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P06336 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.29■□□□□ 0.68
P06336 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P06336 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.29■□□□□ 0.68
P06336 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P06336 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
P06336 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
P06336 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
P06336 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
P06336 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
P06336 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P06336 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
P06336 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P06336 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P06336 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
P06336 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
P06336 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.28■□□□□ 0.68
P06336 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P06336 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
P06336 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P06336 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P06336 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P06336 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.27■□□□□ 0.68
P06336 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.27■□□□□ 0.68
P06336 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
P06336 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
P06336 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.26■□□□□ 0.67
P06336 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.26■□□□□ 0.67
P06336 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
P06336 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.26■□□□□ 0.67
P06336 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P06336 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
P06336 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P06336 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
P06336 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P06336 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.25■□□□□ 0.67
P06336 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.25■□□□□ 0.67
P06336 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.25■□□□□ 0.67
P06336 Gm40881-201ENSMUST00000223397 166 ntBASIC19.25■□□□□ 0.67
P06336 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P06336 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
P06336 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
P06336 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P06336 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.25■□□□□ 0.67
P06336 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P06336 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P06336 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
P06336 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.24■□□□□ 0.67
P06336 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P06336 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
P06336 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.24■□□□□ 0.67
P06336 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06336 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06336 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06336 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06336 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06336 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.23■□□□□ 0.67
P06336 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06336 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06336 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06336 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P06336 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P06336 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
P06336 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.22■□□□□ 0.67
P06336 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P06336 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
P06336 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P06336 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.21■□□□□ 0.67
P06336 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
P06336 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
P06336 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
P06336 Etf1-202ENSMUST00000180351 108 ntBASIC19.21■□□□□ 0.67
P06336 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P06336 Gm9959-201ENSMUST00000068277 390 ntBASIC19.21■□□□□ 0.67
P06336 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
P06336 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P06336 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
P06336 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P06336 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P06336 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P06336 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.2■□□□□ 0.66
P06336 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P06336 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P06336 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
P06336 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms