Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn2O70591 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn2O70591 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pfdn2O70591 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn2O70591 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn2O70591 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn2O70591 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn2O70591 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn2O70591 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn2O70591 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pfdn2O70591 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn2O70591 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pfdn2O70591 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
Pfdn2O70591 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn2O70591 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn2O70591 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.19■□□□□ 0.34
Pfdn2O70591 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn2O70591 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn2O70591 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn2O70591 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn2O70591 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pfdn2O70591 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn2O70591 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.18■□□□□ 0.34
Pfdn2O70591 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pfdn2O70591 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn2O70591 Gm45364-201ENSMUST00000210883 159 ntBASIC17.18■□□□□ 0.34
Pfdn2O70591 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.18■□□□□ 0.34
Pfdn2O70591 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn2O70591 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn2O70591 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Pfdn2O70591 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn2O70591 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn2O70591 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn2O70591 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pfdn2O70591 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pfdn2O70591 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn2O70591 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn2O70591 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn2O70591 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn2O70591 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn2O70591 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn2O70591 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn2O70591 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn2O70591 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pfdn2O70591 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn2O70591 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn2O70591 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn2O70591 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn2O70591 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Pfdn2O70591 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pfdn2O70591 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Pfdn2O70591 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pfdn2O70591 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.16■□□□□ 0.34
Pfdn2O70591 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn2O70591 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Pfdn2O70591 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn2O70591 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.15■□□□□ 0.34
Pfdn2O70591 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn2O70591 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn2O70591 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn2O70591 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pfdn2O70591 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pfdn2O70591 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.34
Pfdn2O70591 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn2O70591 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.14■□□□□ 0.33
Pfdn2O70591 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Pfdn2O70591 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Pfdn2O70591 Gm22567-201ENSMUST00000175542 342 ntBASIC17.14■□□□□ 0.33
Pfdn2O70591 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn2O70591 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn2O70591 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn2O70591 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pfdn2O70591 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pfdn2O70591 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn2O70591 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn2O70591 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn2O70591 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.13■□□□□ 0.33
Pfdn2O70591 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn2O70591 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Pfdn2O70591 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pfdn2O70591 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn2O70591 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn2O70591 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn2O70591 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn2O70591 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pfdn2O70591 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.13■□□□□ 0.33
Pfdn2O70591 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn2O70591 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn2O70591 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Pfdn2O70591 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Pfdn2O70591 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn2O70591 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn2O70591 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pfdn2O70591 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn2O70591 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn2O70591 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn2O70591 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pfdn2O70591 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.12■□□□□ 0.33
Pfdn2O70591 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pfdn2O70591 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms