Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Per2O54943 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Per2O54943 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.81■■□□□ 1.08
Per2O54943 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.81■■□□□ 1.08
Per2O54943 Gm45444-201ENSMUST00000211394 898 ntBASIC21.81■■□□□ 1.08
Per2O54943 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Per2O54943 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Per2O54943 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Per2O54943 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Per2O54943 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
Per2O54943 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Per2O54943 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Per2O54943 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Per2O54943 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Per2O54943 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Per2O54943 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Per2O54943 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Per2O54943 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Per2O54943 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.79■■□□□ 1.08
Per2O54943 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Per2O54943 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Per2O54943 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.79■■□□□ 1.08
Per2O54943 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Per2O54943 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Per2O54943 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Per2O54943 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Per2O54943 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Per2O54943 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Per2O54943 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Per2O54943 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Per2O54943 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
Per2O54943 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.77■■□□□ 1.08
Per2O54943 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.77■■□□□ 1.08
Per2O54943 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Per2O54943 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.77■■□□□ 1.08
Per2O54943 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.77■■□□□ 1.08
Per2O54943 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Per2O54943 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Per2O54943 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Per2O54943 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Per2O54943 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Per2O54943 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Per2O54943 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Per2O54943 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Per2O54943 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Per2O54943 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Per2O54943 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Per2O54943 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.75■■□□□ 1.07
Per2O54943 Gm5921-201ENSMUST00000075898 882 ntBASIC21.75■■□□□ 1.07
Per2O54943 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Per2O54943 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Per2O54943 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Per2O54943 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Per2O54943 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Per2O54943 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Per2O54943 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Per2O54943 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Per2O54943 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Per2O54943 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Per2O54943 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.73■■□□□ 1.07
Per2O54943 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Per2O54943 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Per2O54943 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Per2O54943 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Per2O54943 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
Per2O54943 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Per2O54943 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Per2O54943 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Per2O54943 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Per2O54943 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Per2O54943 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Per2O54943 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Per2O54943 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.72■■□□□ 1.07
Per2O54943 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Per2O54943 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Per2O54943 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Per2O54943 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.72■■□□□ 1.07
Per2O54943 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Per2O54943 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Per2O54943 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Per2O54943 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Per2O54943 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Per2O54943 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Per2O54943 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Per2O54943 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Per2O54943 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.7■■□□□ 1.06
Per2O54943 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.7■■□□□ 1.06
Per2O54943 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Per2O54943 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Per2O54943 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Per2O54943 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Per2O54943 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.69■■□□□ 1.06
Per2O54943 Gm43566-201ENSMUST00000196851 808 ntBASIC21.69■■□□□ 1.06
Per2O54943 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.69■■□□□ 1.06
Per2O54943 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Per2O54943 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.69■■□□□ 1.06
Per2O54943 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.68■■□□□ 1.06
Per2O54943 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Per2O54943 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Per2O54943 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms