Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.18■□□□□ 0.98
Sema3aO08665 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Sema3aO08665 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sema3aO08665 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sema3aO08665 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sema3aO08665 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sema3aO08665 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Sema3aO08665 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.17■□□□□ 0.98
Sema3aO08665 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sema3aO08665 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Sema3aO08665 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sema3aO08665 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sema3aO08665 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sema3aO08665 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sema3aO08665 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.16■□□□□ 0.98
Sema3aO08665 Gm15820-201ENSMUST00000201566 728 ntBASIC21.16■□□□□ 0.98
Sema3aO08665 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.16■□□□□ 0.98
Sema3aO08665 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.16■□□□□ 0.98
Sema3aO08665 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sema3aO08665 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sema3aO08665 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Sema3aO08665 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sema3aO08665 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.15■□□□□ 0.98
Sema3aO08665 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sema3aO08665 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sema3aO08665 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sema3aO08665 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sema3aO08665 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Sema3aO08665 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.14■□□□□ 0.97
Sema3aO08665 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC21.14■□□□□ 0.97
Sema3aO08665 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sema3aO08665 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sema3aO08665 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sema3aO08665 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.13■□□□□ 0.97
Sema3aO08665 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sema3aO08665 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.13■□□□□ 0.97
Sema3aO08665 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sema3aO08665 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sema3aO08665 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Sema3aO08665 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.12■□□□□ 0.97
Sema3aO08665 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Sema3aO08665 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sema3aO08665 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sema3aO08665 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sema3aO08665 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sema3aO08665 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sema3aO08665 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sema3aO08665 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.11■□□□□ 0.97
Sema3aO08665 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3aO08665 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3aO08665 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3aO08665 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3aO08665 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3aO08665 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sema3aO08665 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Sema3aO08665 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3aO08665 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3aO08665 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Sema3aO08665 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sema3aO08665 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Sema3aO08665 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sema3aO08665 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Sema3aO08665 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sema3aO08665 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3aO08665 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3aO08665 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3aO08665 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3aO08665 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Sema3aO08665 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3aO08665 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.07■□□□□ 0.96
Sema3aO08665 Gm40881-201ENSMUST00000223397 166 ntBASIC21.07■□□□□ 0.96
Sema3aO08665 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3aO08665 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3aO08665 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3aO08665 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sema3aO08665 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
Sema3aO08665 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3aO08665 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3aO08665 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.06■□□□□ 0.96
Sema3aO08665 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Sema3aO08665 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sema3aO08665 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.05■□□□□ 0.96
Sema3aO08665 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sema3aO08665 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.05■□□□□ 0.96
Sema3aO08665 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.05■□□□□ 0.96
Sema3aO08665 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sema3aO08665 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sema3aO08665 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sema3aO08665 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
Sema3aO08665 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sema3aO08665 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sema3aO08665 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3aO08665 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sema3aO08665 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.04■□□□□ 0.96
Sema3aO08665 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.04■□□□□ 0.96
Sema3aO08665 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3aO08665 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3aO08665 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3aO08665 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sema3aO08665 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms