Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
AlyrefO08583 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AlyrefO08583 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
AlyrefO08583 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
AlyrefO08583 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
AlyrefO08583 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
AlyrefO08583 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AlyrefO08583 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
AlyrefO08583 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
AlyrefO08583 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
AlyrefO08583 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
AlyrefO08583 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.19■□□□□ 0.98
AlyrefO08583 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.19■□□□□ 0.98
AlyrefO08583 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
AlyrefO08583 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
AlyrefO08583 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
AlyrefO08583 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
AlyrefO08583 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.18■□□□□ 0.98
AlyrefO08583 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.18■□□□□ 0.98
AlyrefO08583 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
AlyrefO08583 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.18■□□□□ 0.98
AlyrefO08583 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
AlyrefO08583 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AlyrefO08583 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
AlyrefO08583 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AlyrefO08583 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AlyrefO08583 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AlyrefO08583 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
AlyrefO08583 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.17■□□□□ 0.98
AlyrefO08583 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AlyrefO08583 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
AlyrefO08583 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.17■□□□□ 0.98
AlyrefO08583 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
AlyrefO08583 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
AlyrefO08583 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
AlyrefO08583 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
AlyrefO08583 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AlyrefO08583 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.16■□□□□ 0.98
AlyrefO08583 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.16■□□□□ 0.98
AlyrefO08583 AC135963.1-201ENSMUST00000211640 717 ntBASIC21.16■□□□□ 0.98
AlyrefO08583 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
AlyrefO08583 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AlyrefO08583 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
AlyrefO08583 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
AlyrefO08583 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
AlyrefO08583 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AlyrefO08583 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.15■□□□□ 0.98
AlyrefO08583 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
AlyrefO08583 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AlyrefO08583 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AlyrefO08583 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AlyrefO08583 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AlyrefO08583 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
AlyrefO08583 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
AlyrefO08583 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
AlyrefO08583 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
AlyrefO08583 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
AlyrefO08583 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
AlyrefO08583 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
AlyrefO08583 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.14■□□□□ 0.97
AlyrefO08583 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.14■□□□□ 0.97
AlyrefO08583 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AlyrefO08583 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AlyrefO08583 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
AlyrefO08583 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
AlyrefO08583 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
AlyrefO08583 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.13■□□□□ 0.97
AlyrefO08583 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.13■□□□□ 0.97
AlyrefO08583 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AlyrefO08583 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
AlyrefO08583 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AlyrefO08583 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
AlyrefO08583 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
AlyrefO08583 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
AlyrefO08583 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AlyrefO08583 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AlyrefO08583 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AlyrefO08583 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.12■□□□□ 0.97
AlyrefO08583 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
AlyrefO08583 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.12■□□□□ 0.97
AlyrefO08583 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.12■□□□□ 0.97
AlyrefO08583 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
AlyrefO08583 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
AlyrefO08583 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
AlyrefO08583 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AlyrefO08583 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AlyrefO08583 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
AlyrefO08583 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
AlyrefO08583 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.11■□□□□ 0.97
AlyrefO08583 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.11■□□□□ 0.97
AlyrefO08583 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
AlyrefO08583 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AlyrefO08583 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AlyrefO08583 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
AlyrefO08583 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.1■□□□□ 0.97
AlyrefO08583 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AlyrefO08583 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.1■□□□□ 0.97
AlyrefO08583 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
AlyrefO08583 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
AlyrefO08583 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms