Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm3139J3QK78 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm3139J3QK78 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm3139J3QK78 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Gm3139J3QK78 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.93■□□□□ 0.94
Gm3139J3QK78 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm3139J3QK78 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Gm3139J3QK78 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.92■□□□□ 0.94
Gm3139J3QK78 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.92■□□□□ 0.94
Gm3139J3QK78 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3139J3QK78 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3139J3QK78 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.92■□□□□ 0.94
Gm3139J3QK78 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3139J3QK78 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3139J3QK78 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm3139J3QK78 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3139J3QK78 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3139J3QK78 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3139J3QK78 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3139J3QK78 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3139J3QK78 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm3139J3QK78 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Gm3139J3QK78 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3139J3QK78 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3139J3QK78 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3139J3QK78 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.9■□□□□ 0.94
Gm3139J3QK78 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3139J3QK78 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Gm3139J3QK78 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Gm3139J3QK78 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3139J3QK78 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3139J3QK78 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3139J3QK78 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
Gm3139J3QK78 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3139J3QK78 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3139J3QK78 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Gm3139J3QK78 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3139J3QK78 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3139J3QK78 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3139J3QK78 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3139J3QK78 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3139J3QK78 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3139J3QK78 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3139J3QK78 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Gm3139J3QK78 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3139J3QK78 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3139J3QK78 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3139J3QK78 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Gm3139J3QK78 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3139J3QK78 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3139J3QK78 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.87■□□□□ 0.93
Gm3139J3QK78 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Gm3139J3QK78 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3139J3QK78 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3139J3QK78 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3139J3QK78 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3139J3QK78 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3139J3QK78 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Gm3139J3QK78 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3139J3QK78 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Gm3139J3QK78 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3139J3QK78 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3139J3QK78 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3139J3QK78 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3139J3QK78 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Gm3139J3QK78 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
Gm3139J3QK78 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3139J3QK78 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3139J3QK78 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3139J3QK78 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.84■□□□□ 0.93
Gm3139J3QK78 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3139J3QK78 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3139J3QK78 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3139J3QK78 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3139J3QK78 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Gm3139J3QK78 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Gm3139J3QK78 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3139J3QK78 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
Gm3139J3QK78 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3139J3QK78 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Gm3139J3QK78 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Gm3139J3QK78 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Gm3139J3QK78 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3139J3QK78 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Gm3139J3QK78 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Gm3139J3QK78 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
Gm3139J3QK78 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Gm3139J3QK78 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3139J3QK78 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3139J3QK78 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Gm3139J3QK78 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3139J3QK78 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3139J3QK78 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.81■□□□□ 0.92
Gm3139J3QK78 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3139J3QK78 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3139J3QK78 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Gm3139J3QK78 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Gm3139J3QK78 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.8■□□□□ 0.92
Gm3139J3QK78 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.8■□□□□ 0.92
Gm3139J3QK78 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms