Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh1F7BJK1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh1F7BJK1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh1F7BJK1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh1F7BJK1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh1F7BJK1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdh1F7BJK1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh1F7BJK1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh1F7BJK1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdh1F7BJK1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh1F7BJK1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh1F7BJK1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh1F7BJK1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdh1F7BJK1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh1F7BJK1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdh1F7BJK1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh1F7BJK1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh1F7BJK1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh1F7BJK1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh1F7BJK1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Pcdh1F7BJK1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pcdh1F7BJK1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh1F7BJK1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh1F7BJK1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh1F7BJK1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh1F7BJK1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh1F7BJK1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh1F7BJK1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh1F7BJK1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh1F7BJK1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh1F7BJK1 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.74■□□□□ 0.59
Pcdh1F7BJK1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh1F7BJK1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh1F7BJK1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh1F7BJK1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdh1F7BJK1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh1F7BJK1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh1F7BJK1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh1F7BJK1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh1F7BJK1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh1F7BJK1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
Pcdh1F7BJK1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh1F7BJK1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh1F7BJK1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh1F7BJK1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh1F7BJK1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh1F7BJK1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh1F7BJK1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh1F7BJK1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh1F7BJK1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdh1F7BJK1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pcdh1F7BJK1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Pcdh1F7BJK1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdh1F7BJK1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Pcdh1F7BJK1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh1F7BJK1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh1F7BJK1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh1F7BJK1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh1F7BJK1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh1F7BJK1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh1F7BJK1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdh1F7BJK1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh1F7BJK1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh1F7BJK1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdh1F7BJK1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdh1F7BJK1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms