Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gm43017-201ENSMUST00000198296 752 ntBASIC18.85■□□□□ 0.61
Dchs1E9PVD3 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.85■□□□□ 0.61
Dchs1E9PVD3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.85■□□□□ 0.61
Dchs1E9PVD3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Dchs1E9PVD3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Dchs1E9PVD3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Dchs1E9PVD3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Dchs1E9PVD3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.85■□□□□ 0.61
Dchs1E9PVD3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dchs1E9PVD3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dchs1E9PVD3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dchs1E9PVD3 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Dchs1E9PVD3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.84■□□□□ 0.61
Dchs1E9PVD3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Dchs1E9PVD3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Dchs1E9PVD3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Dchs1E9PVD3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Dchs1E9PVD3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dchs1E9PVD3 Gm27405-201ENSMUST00000184201 112 ntBASIC18.83■□□□□ 0.6
Dchs1E9PVD3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Dchs1E9PVD3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Dchs1E9PVD3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dchs1E9PVD3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Dchs1E9PVD3 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.82■□□□□ 0.6
Dchs1E9PVD3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.82■□□□□ 0.6
Dchs1E9PVD3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Dchs1E9PVD3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Dchs1E9PVD3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Dchs1E9PVD3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Dchs1E9PVD3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dchs1E9PVD3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Dchs1E9PVD3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dchs1E9PVD3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Dchs1E9PVD3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Dchs1E9PVD3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Dchs1E9PVD3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dchs1E9PVD3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.8■□□□□ 0.6
Dchs1E9PVD3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dchs1E9PVD3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dchs1E9PVD3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Dchs1E9PVD3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Dchs1E9PVD3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Dchs1E9PVD3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dchs1E9PVD3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dchs1E9PVD3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.8■□□□□ 0.6
Dchs1E9PVD3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.8■□□□□ 0.6
Dchs1E9PVD3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Dchs1E9PVD3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dchs1E9PVD3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.79■□□□□ 0.6
Dchs1E9PVD3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dchs1E9PVD3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dchs1E9PVD3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dchs1E9PVD3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Dchs1E9PVD3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Dchs1E9PVD3 Gm43137-201ENSMUST00000198052 594 ntBASIC18.79■□□□□ 0.6
Dchs1E9PVD3 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.79■□□□□ 0.6
Dchs1E9PVD3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Dchs1E9PVD3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.78■□□□□ 0.6
Dchs1E9PVD3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dchs1E9PVD3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Dchs1E9PVD3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Dchs1E9PVD3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dchs1E9PVD3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Dchs1E9PVD3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Dchs1E9PVD3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Dchs1E9PVD3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.78■□□□□ 0.6
Dchs1E9PVD3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.78■□□□□ 0.6
Dchs1E9PVD3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dchs1E9PVD3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dchs1E9PVD3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Dchs1E9PVD3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dchs1E9PVD3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Dchs1E9PVD3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Dchs1E9PVD3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Dchs1E9PVD3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Dchs1E9PVD3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dchs1E9PVD3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Dchs1E9PVD3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Dchs1E9PVD3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
Dchs1E9PVD3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.76■□□□□ 0.59
Dchs1E9PVD3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.76■□□□□ 0.59
Dchs1E9PVD3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dchs1E9PVD3 Mir7075-201ENSMUST00000184187 82 ntBASIC18.75■□□□□ 0.59
Dchs1E9PVD3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Dchs1E9PVD3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Dchs1E9PVD3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Dchs1E9PVD3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Dchs1E9PVD3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dchs1E9PVD3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Dchs1E9PVD3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Dchs1E9PVD3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dchs1E9PVD3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Dchs1E9PVD3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Dchs1E9PVD3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.73■□□□□ 0.59
Dchs1E9PVD3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Dchs1E9PVD3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.73■□□□□ 0.59
Dchs1E9PVD3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dchs1E9PVD3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.73■□□□□ 0.59
Dchs1E9PVD3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Dchs1E9PVD3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms