Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trav7n-5A0A075B604 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.18■□□□□ 0.34
Trav7n-5A0A075B604 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7n-5A0A075B604 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7n-5A0A075B604 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7n-5A0A075B604 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7n-5A0A075B604 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav7n-5A0A075B604 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-5A0A075B604 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-5A0A075B604 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Trav7n-5A0A075B604 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-5A0A075B604 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.17■□□□□ 0.34
Trav7n-5A0A075B604 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-5A0A075B604 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-5A0A075B604 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-5A0A075B604 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.17■□□□□ 0.34
Trav7n-5A0A075B604 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trav7n-5A0A075B604 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav7n-5A0A075B604 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7n-5A0A075B604 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Trav7n-5A0A075B604 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7n-5A0A075B604 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav7n-5A0A075B604 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav7n-5A0A075B604 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.16■□□□□ 0.34
Trav7n-5A0A075B604 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7n-5A0A075B604 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav7n-5A0A075B604 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav7n-5A0A075B604 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7n-5A0A075B604 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Trav7n-5A0A075B604 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7n-5A0A075B604 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav7n-5A0A075B604 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7n-5A0A075B604 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
Trav7n-5A0A075B604 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7n-5A0A075B604 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav7n-5A0A075B604 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav7n-5A0A075B604 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav7n-5A0A075B604 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav7n-5A0A075B604 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7n-5A0A075B604 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7n-5A0A075B604 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7n-5A0A075B604 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7n-5A0A075B604 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7n-5A0A075B604 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7n-5A0A075B604 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7n-5A0A075B604 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7n-5A0A075B604 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav7n-5A0A075B604 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Trav7n-5A0A075B604 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7n-5A0A075B604 Gm14117-201ENSMUST00000122417 843 ntBASIC17.13■□□□□ 0.33
Trav7n-5A0A075B604 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav7n-5A0A075B604 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.13■□□□□ 0.33
Trav7n-5A0A075B604 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7n-5A0A075B604 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav7n-5A0A075B604 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.13■□□□□ 0.33
Trav7n-5A0A075B604 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav7n-5A0A075B604 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7n-5A0A075B604 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7n-5A0A075B604 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.12■□□□□ 0.33
Trav7n-5A0A075B604 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7n-5A0A075B604 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7n-5A0A075B604 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trav7n-5A0A075B604 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7n-5A0A075B604 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7n-5A0A075B604 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav7n-5A0A075B604 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav7n-5A0A075B604 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7n-5A0A075B604 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7n-5A0A075B604 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7n-5A0A075B604 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7n-5A0A075B604 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.11■□□□□ 0.33
Trav7n-5A0A075B604 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7n-5A0A075B604 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7n-5A0A075B604 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7n-5A0A075B604 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav7n-5A0A075B604 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.1■□□□□ 0.33
Trav7n-5A0A075B604 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7n-5A0A075B604 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.1■□□□□ 0.33
Trav7n-5A0A075B604 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trav7n-5A0A075B604 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7n-5A0A075B604 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7n-5A0A075B604 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trav7n-5A0A075B604 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7n-5A0A075B604 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav7n-5A0A075B604 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.1■□□□□ 0.33
Trav7n-5A0A075B604 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trav7n-5A0A075B604 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-5A0A075B604 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-5A0A075B604 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.09■□□□□ 0.33
Trav7n-5A0A075B604 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-5A0A075B604 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-5A0A075B604 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-5A0A075B604 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-5A0A075B604 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-5A0A075B604 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-5A0A075B604 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav7n-5A0A075B604 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav7n-5A0A075B604 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav7n-5A0A075B604 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.08■□□□□ 0.32
Trav7n-5A0A075B604 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms