Protein–RNA interactions for Protein: A0A075B5L3

Igkv4-90, Immunoglobulin kappa chain variable 4-90 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-90A0A075B5L3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.18■□□□□ 0.18
Igkv4-90A0A075B5L3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv4-90A0A075B5L3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv4-90A0A075B5L3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Igkv4-90A0A075B5L3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv4-90A0A075B5L3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.18■□□□□ 0.18
Igkv4-90A0A075B5L3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv4-90A0A075B5L3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv4-90A0A075B5L3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv4-90A0A075B5L3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv4-90A0A075B5L3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv4-90A0A075B5L3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.17■□□□□ 0.18
Igkv4-90A0A075B5L3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv4-90A0A075B5L3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv4-90A0A075B5L3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv4-90A0A075B5L3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-90A0A075B5L3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Igkv4-90A0A075B5L3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-90A0A075B5L3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Igkv4-90A0A075B5L3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.15■□□□□ 0.18
Igkv4-90A0A075B5L3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Igkv4-90A0A075B5L3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv4-90A0A075B5L3 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.15■□□□□ 0.18
Igkv4-90A0A075B5L3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Igkv4-90A0A075B5L3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Igkv4-90A0A075B5L3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-90A0A075B5L3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-90A0A075B5L3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-90A0A075B5L3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-90A0A075B5L3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.14■□□□□ 0.17
Igkv4-90A0A075B5L3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.14■□□□□ 0.17
Igkv4-90A0A075B5L3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-90A0A075B5L3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Igkv4-90A0A075B5L3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv4-90A0A075B5L3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Gm45444-201ENSMUST00000211394 898 ntBASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv4-90A0A075B5L3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv4-90A0A075B5L3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Igkv4-90A0A075B5L3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv4-90A0A075B5L3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv4-90A0A075B5L3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Igkv4-90A0A075B5L3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv4-90A0A075B5L3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.11■□□□□ 0.17
Igkv4-90A0A075B5L3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.11■□□□□ 0.17
Igkv4-90A0A075B5L3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv4-90A0A075B5L3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv4-90A0A075B5L3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv4-90A0A075B5L3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv4-90A0A075B5L3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-90A0A075B5L3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-90A0A075B5L3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-90A0A075B5L3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-90A0A075B5L3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.1■□□□□ 0.17
Igkv4-90A0A075B5L3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-90A0A075B5L3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-90A0A075B5L3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-90A0A075B5L3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-90A0A075B5L3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv4-90A0A075B5L3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms