Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Gm8463-201ENSMUST00000208573 613 ntBASIC11.8□□□□□ -0.52
Ska1Q9CPV1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ska1Q9CPV1 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.79□□□□□ -0.52
Ska1Q9CPV1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ska1Q9CPV1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Gm13612-201ENSMUST00000119276 390 ntBASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Gm11918-201ENSMUST00000121660 179 ntBASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms