Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Gm6023-201ENSMUST00000118217 606 ntBASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Gm27023-201ENSMUST00000182372 285 ntBASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Gm10076-201ENSMUST00000073238 384 ntBASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HnrnpuQ8VEK3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Gm10434-201ENSMUST00000101158 471 ntBASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Gm12058-201ENSMUST00000118614 437 ntBASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC15.49■□□□□ 0.07
HnrnpuQ8VEK3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Gm23931-201ENSMUST00000103842 109 ntBASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Gm22018-201ENSMUST00000104357 131 ntBASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Gm5187-201ENSMUST00000117317 991 ntBASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Gm23119-201ENSMUST00000158610 140 ntBASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Gm27390-201ENSMUST00000184516 176 ntBASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Gm44882-201ENSMUST00000205702 802 ntBASIC15.48■□□□□ 0.07
HnrnpuQ8VEK3 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms