Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHB3P54753 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.15■□□□□ 0.18
EPHB3P54753 TPM3P8-201ENST00000330554 643 ntBASIC16.15■□□□□ 0.18
EPHB3P54753 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 RPL13AP20-201ENST00000459725 609 ntBASIC16.15■□□□□ 0.18
EPHB3P54753 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHB3P54753 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
EPHB3P54753 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHB3P54753 AC007787.1-201ENST00000588095 1583 ntBASIC16.15■□□□□ 0.18
EPHB3P54753 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHB3P54753 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHB3P54753 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHB3P54753 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHB3P54753 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
EPHB3P54753 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.15■□□□□ 0.18
EPHB3P54753 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
EPHB3P54753 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.15■□□□□ 0.18
EPHB3P54753 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.15■□□□□ 0.18
EPHB3P54753 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
EPHB3P54753 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
EPHB3P54753 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.18
EPHB3P54753 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
EPHB3P54753 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.14■□□□□ 0.17
EPHB3P54753 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
EPHB3P54753 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.14■□□□□ 0.17
EPHB3P54753 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.14■□□□□ 0.17
EPHB3P54753 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.14■□□□□ 0.17
EPHB3P54753 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.14■□□□□ 0.17
EPHB3P54753 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
EPHB3P54753 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.14■□□□□ 0.17
EPHB3P54753 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.14■□□□□ 0.17
EPHB3P54753 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.14■□□□□ 0.17
EPHB3P54753 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.14■□□□□ 0.17
EPHB3P54753 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.14■□□□□ 0.17
EPHB3P54753 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.14■□□□□ 0.17
EPHB3P54753 AL645728.2-202ENST00000641679 227 ntBASIC16.14■□□□□ 0.17
EPHB3P54753 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
EPHB3P54753 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
EPHB3P54753 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
EPHB3P54753 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
EPHB3P54753 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.14■□□□□ 0.17
EPHB3P54753 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
EPHB3P54753 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
EPHB3P54753 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
EPHB3P54753 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.14■□□□□ 0.17
EPHB3P54753 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.14■□□□□ 0.17
EPHB3P54753 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
EPHB3P54753 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.14■□□□□ 0.17
EPHB3P54753 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
EPHB3P54753 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
EPHB3P54753 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.13■□□□□ 0.17
EPHB3P54753 AC148477.4-201ENST00000613430 1793 ntBASIC16.13■□□□□ 0.17
EPHB3P54753 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EPHB3P54753 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EPHB3P54753 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.13■□□□□ 0.17
EPHB3P54753 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.13■□□□□ 0.17
EPHB3P54753 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
EPHB3P54753 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
EPHB3P54753 RPL5P21-201ENST00000404620 815 ntBASIC16.13■□□□□ 0.17
EPHB3P54753 AL139094.1-201ENST00000405549 1188 ntBASIC16.13■□□□□ 0.17
EPHB3P54753 MIR1202-201ENST00000408529 83 ntBASIC16.13■□□□□ 0.17
EPHB3P54753 CD8B2-202ENST00000417670 633 ntBASIC16.13■□□□□ 0.17
EPHB3P54753 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
EPHB3P54753 AL590640.2-201ENST00000457038 527 ntBASIC16.13■□□□□ 0.17
EPHB3P54753 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.13■□□□□ 0.17
EPHB3P54753 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
EPHB3P54753 AC108725.1-201ENST00000495472 409 ntBASIC16.13■□□□□ 0.17
EPHB3P54753 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
EPHB3P54753 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.13■□□□□ 0.17
EPHB3P54753 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms