Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.85□□□□□ -0.51
Slc6a11P31650 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.85□□□□□ -0.51
Slc6a11P31650 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Slc6a11P31650 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.85□□□□□ -0.51
Slc6a11P31650 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Gm27501-201ENSMUST00000183599 107 ntBASIC11.85□□□□□ -0.51
Slc6a11P31650 Mir8109-201ENSMUST00000184375 117 ntBASIC11.85□□□□□ -0.51
Slc6a11P31650 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.85□□□□□ -0.51
Slc6a11P31650 Gm19309-201ENSMUST00000218295 205 ntBASIC11.85□□□□□ -0.51
Slc6a11P31650 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.85□□□□□ -0.51
Slc6a11P31650 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Gm8598-201ENSMUST00000221184 836 ntBASIC11.85□□□□□ -0.51
Slc6a11P31650 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Slc6a11P31650 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.85□□□□□ -0.51
Slc6a11P31650 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Slc6a11P31650 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Slc6a11P31650 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Slc6a11P31650 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Slc6a11P31650 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Slc6a11P31650 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.84□□□□□ -0.51
Slc6a11P31650 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.84□□□□□ -0.51
Slc6a11P31650 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.84□□□□□ -0.51
Slc6a11P31650 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.84□□□□□ -0.51
Slc6a11P31650 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.84□□□□□ -0.51
Slc6a11P31650 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.84□□□□□ -0.51
Slc6a11P31650 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.84□□□□□ -0.51
Slc6a11P31650 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.84□□□□□ -0.51
Slc6a11P31650 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.84□□□□□ -0.51
Slc6a11P31650 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Slc6a11P31650 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Slc6a11P31650 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Paupar-201ENSMUST00000194826 3482 ntBASIC11.84□□□□□ -0.51
Slc6a11P31650 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.84□□□□□ -0.51
Slc6a11P31650 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a11P31650 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Slc6a11P31650 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Slc6a11P31650 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Slc6a11P31650 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Slc6a11P31650 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Slc6a11P31650 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Slc6a11P31650 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.83□□□□□ -0.52
Slc6a11P31650 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a11P31650 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Slc6a11P31650 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms