Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smarce1O54941 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smarce1O54941 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.81□□□□□ -0.04
Smarce1O54941 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.81□□□□□ -0.04
Smarce1O54941 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.81□□□□□ -0.04
Smarce1O54941 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Gm38092-201ENSMUST00000195600 653 ntBASIC14.81□□□□□ -0.04
Smarce1O54941 Gm35960-201ENSMUST00000202712 767 ntBASIC14.81□□□□□ -0.04
Smarce1O54941 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Smarce1O54941 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Smarce1O54941 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Smarce1O54941 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Smarce1O54941 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smarce1O54941 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smarce1O54941 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Smarce1O54941 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smarce1O54941 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarce1O54941 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smarce1O54941 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.8□□□□□ -0.04
Smarce1O54941 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.8□□□□□ -0.04
Smarce1O54941 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.8□□□□□ -0.04
Smarce1O54941 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smarce1O54941 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 Gm8652-201ENSMUST00000181363 964 ntBASIC14.8□□□□□ -0.04
Smarce1O54941 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.8□□□□□ -0.04
Smarce1O54941 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Smarce1O54941 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smarce1O54941 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.8□□□□□ -0.04
Smarce1O54941 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Smarce1O54941 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Smarce1O54941 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Smarce1O54941 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smarce1O54941 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarce1O54941 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.8□□□□□ -0.04
Smarce1O54941 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.8□□□□□ -0.04
Smarce1O54941 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smarce1O54941 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.79□□□□□ -0.04
Smarce1O54941 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.79□□□□□ -0.04
Smarce1O54941 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.79□□□□□ -0.04
Smarce1O54941 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Smarce1O54941 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.79□□□□□ -0.04
Smarce1O54941 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.79□□□□□ -0.04
Smarce1O54941 Gm24644-201ENSMUST00000157114 139 ntBASIC14.79□□□□□ -0.04
Smarce1O54941 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.79□□□□□ -0.04
Smarce1O54941 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.79□□□□□ -0.04
Smarce1O54941 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.79□□□□□ -0.04
Smarce1O54941 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarce1O54941 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Smarce1O54941 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.79□□□□□ -0.04
Smarce1O54941 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smarce1O54941 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms